Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.88□□□□□ -1.47
HADHAP40939 AC097486.1-201ENST00000515331 210 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.88□□□□□ -1.47
HADHAP40939 RNA5SP340-201ENST00000517132 107 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.88□□□□□ -1.47
HADHAP40939 OR10D4P-201ENST00000525892 951 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AC027369.2-201ENST00000528030 440 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AP003168.1-201ENST00000530091 307 ntBASIC5.88□□□□□ -1.47
HADHAP40939 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.88□□□□□ -1.47
HADHAP40939 AC079905.1-201ENST00000549280 475 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.88□□□□□ -1.47
HADHAP40939 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.88□□□□□ -1.47
HADHAP40939 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.88□□□□□ -1.47
HADHAP40939 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.88□□□□□ -1.47
HADHAP40939 AL096712.1-201ENST00000614561 159 ntBASIC5.88□□□□□ -1.47
HADHAP40939 RNU6-368P-201ENST00000620928 107 ntBASIC5.88□□□□□ -1.47
HADHAP40939 RNU6-538P-201ENST00000622329 107 ntBASIC5.88□□□□□ -1.47
HADHAP40939 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.88□□□□□ -1.47
HADHAP40939 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HADHAP40939 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.88□□□□□ -1.47
HADHAP40939 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 RLIMP2-201ENST00000427891 1563 ntBASIC5.88□□□□□ -1.47
HADHAP40939 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HADHAP40939 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HADHAP40939 AC004076.2-201ENST00000620532 3323 ntBASIC5.87□□□□□ -1.47
HADHAP40939 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 SNORA27.3-201ENST00000364937 134 ntBASIC5.87□□□□□ -1.47
HADHAP40939 RN7SKP269-201ENST00000365545 319 ntBASIC5.87□□□□□ -1.47
HADHAP40939 HMGN1P20-201ENST00000411849 300 ntBASIC5.87□□□□□ -1.47
HADHAP40939 BX284632.2-201ENST00000421091 399 ntBASIC5.87□□□□□ -1.47
HADHAP40939 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.87□□□□□ -1.47
HADHAP40939 AL606490.7-201ENST00000433136 191 ntBASIC5.87□□□□□ -1.47
HADHAP40939 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 AL512605.1-202ENST00000441919 381 ntBASIC5.87□□□□□ -1.47
HADHAP40939 AL359955.2-201ENST00000445380 353 ntBASIC5.87□□□□□ -1.47
HADHAP40939 AL500527.1-201ENST00000448532 255 ntBASIC5.87□□□□□ -1.47
HADHAP40939 RPL12P39-201ENST00000455456 496 ntBASIC5.87□□□□□ -1.47
HADHAP40939 CST12P-201ENST00000457644 362 ntBASIC5.87□□□□□ -1.47
HADHAP40939 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 AC006539.1-201ENST00000481419 501 ntBASIC5.87□□□□□ -1.47
HADHAP40939 RN7SL193P-201ENST00000491708 276 ntBASIC5.87□□□□□ -1.47
HADHAP40939 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.87□□□□□ -1.47
HADHAP40939 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 TRIM77BP-201ENST00000524985 1119 ntBASIC5.87□□□□□ -1.47
HADHAP40939 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 MIMT1-201ENST00000597105 1050 ntBASIC5.87□□□□□ -1.47
HADHAP40939 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.87□□□□□ -1.47
HADHAP40939 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.87□□□□□ -1.47
HADHAP40939 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.87□□□□□ -1.47
HADHAP40939 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.87□□□□□ -1.47
HADHAP40939 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HADHAP40939 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.86□□□□□ -1.47
HADHAP40939 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.86□□□□□ -1.47
HADHAP40939 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HADHAP40939 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HADHAP40939 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HADHAP40939 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.86□□□□□ -1.47
HADHAP40939 AF287957.1-201ENST00000607368 1595 ntBASIC5.86□□□□□ -1.47
HADHAP40939 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HADHAP40939 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HADHAP40939 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.86□□□□□ -1.47
HADHAP40939 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HADHAP40939 RNA5SP122-201ENST00000384457 108 ntBASIC5.86□□□□□ -1.47
HADHAP40939 MIR323B-201ENST00000385269 82 ntBASIC5.86□□□□□ -1.47
HADHAP40939 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.86□□□□□ -1.47
HADHAP40939 MTND4LP13-201ENST00000425022 298 ntBASIC5.86□□□□□ -1.47
HADHAP40939 MTND4LP14-201ENST00000429447 288 ntBASIC5.86□□□□□ -1.47
HADHAP40939 BX276092.6-201ENST00000430476 250 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms