Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 MIR323A-201ENST00000362199 86 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 RNU1-150P-201ENST00000362491 162 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 RNA5SP30-201ENST00000365552 115 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 NENFP1-201ENST00000419476 466 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 BX119321.1-201ENST00000428912 797 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 UBFD1P1-201ENST00000473259 814 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 RN7SL174P-201ENST00000475578 289 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 OR4A17P-201ENST00000526032 904 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 PMS2P3-207ENST00000529061 717 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 MIR4660-201ENST00000583549 74 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC015802.2-201ENST00000589690 189 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC011445.2-201ENST00000599274 173 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC010632.3-201ENST00000611377 369 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC079097.1-201ENST00000512187 1399 ntBASIC4.22□□□□□ -1.73
HLA-DMBP28068 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMBP28068 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMBP28068 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DMBP28068 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DMBP28068 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DMBP28068 ICE2P1-201ENST00000512800 1849 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 OR9K1P-202ENST00000641111 3217 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC092681.1-201ENST00000297369 291 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 RMRPP5-201ENST00000411156 267 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 CDY17P-201ENST00000414121 1282 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 RPL7P56-201ENST00000429441 717 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC073465.2-201ENST00000440938 498 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 HMGN1P36-201ENST00000446623 298 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AZGP1P2-201ENST00000454506 345 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 RPS23P6-201ENST00000466136 431 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 RN7SL583P-201ENST00000475692 287 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 ATP5LP5-201ENST00000483050 299 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 GOLGA5P1-201ENST00000507317 980 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC106872.4-201ENST00000510050 523 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 RNU6-964P-201ENST00000516524 69 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 SNORA70.20-201ENST00000516848 126 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 RNA5SP230-201ENST00000517039 122 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC079064.1-201ENST00000528365 362 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC068993.1-201ENST00000546724 589 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AP001496.3-201ENST00000580230 913 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC063977.5-201ENST00000601044 974 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AL139124.1-201ENST00000609123 421 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC126175.1-201ENST00000617041 758 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AP005431.1-201ENST00000618479 319 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 RNF19BPY-201ENST00000458209 1550 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 OR4G1P-202ENST00000641173 1788 ntBASIC4.21□□□□□ -1.74
HLA-DMBP28068 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMBP28068 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms