Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.21□□□□□ -1.42
ATF4P18848 CYCSP2-201ENST00000558168 301 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC090515.3-201ENST00000560431 315 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC083837.1-201ENST00000565297 2994 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.21□□□□□ -1.42
ATF4P18848 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.21□□□□□ -1.42
ATF4P18848 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC6.21□□□□□ -1.42
ATF4P18848 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.21□□□□□ -1.42
ATF4P18848 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 AC123786.2-201ENST00000603459 275 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC140658.6-201ENST00000603958 201 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AL136363.2-201ENST00000604173 851 ntBASIC6.21□□□□□ -1.42
ATF4P18848 CR382285.1-202ENST00000604687 547 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC107214.2-201ENST00000608204 634 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AC243773.3-201ENST00000613270 256 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
ATF4P18848 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 AP000766.1-201ENST00000561746 4140 ntBASIC6.21□□□□□ -1.42
ATF4P18848 AL356473.1-201ENST00000406203 1408 ntBASIC6.21□□□□□ -1.42
ATF4P18848 CYP1D1P-201ENST00000416662 1433 ntBASIC6.21□□□□□ -1.42
ATF4P18848 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 AC027575.3-201ENST00000583058 2747 ntBASIC6.21□□□□□ -1.42
ATF4P18848 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.21□□□□□ -1.42
ATF4P18848 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.21□□□□□ -1.42
ATF4P18848 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.21□□□□□ -1.42
ATF4P18848 AC087045.3-201ENST00000623046 2468 ntBASIC6.21□□□□□ -1.42
ATF4P18848 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
ATF4P18848 AC027514.1-201ENST00000588561 1603 ntBASIC6.21□□□□□ -1.42
ATF4P18848 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ATF4P18848 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 OR9M1P-202ENST00000641564 3163 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 TTTY25P-201ENST00000558356 1505 ntBASIC6.2□□□□□ -1.42
ATF4P18848 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 FGF7P2-201ENST00000332473 296 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RNU1-85P-201ENST00000364127 164 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RN7SKP208-201ENST00000365474 361 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RNU6-1042P-201ENST00000384204 107 ntBASIC6.2□□□□□ -1.42
ATF4P18848 U3.28-201ENST00000391249 210 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AL049697.3-201ENST00000406493 982 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RNU2-50P-201ENST00000410494 143 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 AC004448.2-201ENST00000422360 586 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AL031733.1-201ENST00000422817 455 ntBASIC6.2□□□□□ -1.42
ATF4P18848 SDCBPP2-201ENST00000424643 885 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AL365184.2-201ENST00000431139 435 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LARP1BP3-201ENST00000437229 869 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AL772284.1-201ENST00000443421 905 ntBASIC6.2□□□□□ -1.42
ATF4P18848 BMS1P10-201ENST00000443754 1120 ntBASIC6.2□□□□□ -1.42
ATF4P18848 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.2□□□□□ -1.42
ATF4P18848 AL161454.1-201ENST00000446226 569 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC073909.1-201ENST00000447112 999 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 RPL10P17-201ENST00000453852 316 ntBASIC6.2□□□□□ -1.42
ATF4P18848 MTCYBP1-201ENST00000454315 1119 ntBASIC6.2□□□□□ -1.42
ATF4P18848 SRRM1P2-201ENST00000464531 1192 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC004801.2-201ENST00000468202 779 ntBASIC6.2□□□□□ -1.42
ATF4P18848 DAZAP2P1-201ENST00000475212 503 ntBASIC6.2□□□□□ -1.42
ATF4P18848 RN7SL135P-201ENST00000490144 278 ntBASIC6.2□□□□□ -1.42
ATF4P18848 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 AC107401.1-201ENST00000503426 685 ntBASIC6.2□□□□□ -1.42
ATF4P18848 GSTO3P-201ENST00000504733 718 ntBASIC6.2□□□□□ -1.42
ATF4P18848 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ATF4P18848 AC011411.1-201ENST00000509592 876 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC006499.4-201ENST00000510947 694 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.2□□□□□ -1.42
ATF4P18848 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 OR4A12P-201ENST00000530847 918 ntBASIC6.2□□□□□ -1.42
ATF4P18848 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.2□□□□□ -1.42
ATF4P18848 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.2□□□□□ -1.42
ATF4P18848 AL121579.2-201ENST00000555466 590 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms