Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.12□□□□□ -1.59
NCK1P16333 AC100784.1-201ENST00000522790 310 ntBASIC5.12□□□□□ -1.59
NCK1P16333 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NCK1P16333 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.12□□□□□ -1.59
NCK1P16333 LSM3P2-201ENST00000551246 273 ntBASIC5.12□□□□□ -1.59
NCK1P16333 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.12□□□□□ -1.59
NCK1P16333 AC040958.1-201ENST00000561102 201 ntBASIC5.12□□□□□ -1.59
NCK1P16333 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 AC002519.2-203ENST00000567043 837 ntBASIC5.12□□□□□ -1.59
NCK1P16333 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.12□□□□□ -1.59
NCK1P16333 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 VN1R81P-201ENST00000602085 372 ntBASIC5.12□□□□□ -1.59
NCK1P16333 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.12□□□□□ -1.59
NCK1P16333 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.12□□□□□ -1.59
NCK1P16333 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.12□□□□□ -1.59
NCK1P16333 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.12□□□□□ -1.59
NCK1P16333 AC097461.1-201ENST00000568928 2821 ntBASIC5.12□□□□□ -1.59
NCK1P16333 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NCK1P16333 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.12□□□□□ -1.59
NCK1P16333 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NCK1P16333 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.11□□□□□ -1.59
NCK1P16333 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 RNA5SP273-201ENST00000362484 113 ntBASIC5.11□□□□□ -1.59
NCK1P16333 MIR191-201ENST00000384873 92 ntBASIC5.11□□□□□ -1.59
NCK1P16333 CDY17P-201ENST00000414121 1282 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.11□□□□□ -1.59
NCK1P16333 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 AK4P4-201ENST00000419465 646 ntBASIC5.11□□□□□ -1.59
NCK1P16333 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 RPL12P43-201ENST00000420608 499 ntBASIC5.11□□□□□ -1.59
NCK1P16333 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.11□□□□□ -1.59
NCK1P16333 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.11□□□□□ -1.59
NCK1P16333 CDY8P-201ENST00000428380 1279 ntBASIC5.11□□□□□ -1.59
NCK1P16333 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AL356121.1-201ENST00000442911 156 ntBASIC5.11□□□□□ -1.59
NCK1P16333 CDY20P-201ENST00000447528 1279 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 PPIAP27-201ENST00000453800 265 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC239798.3-201ENST00000454459 408 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC021660.1-201ENST00000465006 554 ntBASIC5.11□□□□□ -1.59
NCK1P16333 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.11□□□□□ -1.59
NCK1P16333 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 RPL15P21-201ENST00000495592 567 ntBASIC5.11□□□□□ -1.59
NCK1P16333 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.11□□□□□ -1.59
NCK1P16333 RNA5SP438-201ENST00000516561 112 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.11□□□□□ -1.59
NCK1P16333 OR4A41P-201ENST00000533053 928 ntBASIC5.11□□□□□ -1.59
NCK1P16333 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.11□□□□□ -1.59
NCK1P16333 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.11□□□□□ -1.59
NCK1P16333 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
NCK1P16333 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 AP005212.4-201ENST00000614206 710 ntBASIC5.11□□□□□ -1.59
NCK1P16333 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.11□□□□□ -1.59
NCK1P16333 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.11□□□□□ -1.59
NCK1P16333 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.11□□□□□ -1.59
NCK1P16333 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NCK1P16333 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCK1P16333 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NCK1P16333 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NCK1P16333 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCK1P16333 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCK1P16333 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
NCK1P16333 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms