Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC016252.1-201ENST00000609721 474 ntBASIC4.35□□□□□ -1.71
CD28P10747 AL589935.2-201ENST00000616471 1231 ntBASIC4.35□□□□□ -1.71
CD28P10747 MIR6730-201ENST00000622213 67 ntBASIC4.35□□□□□ -1.71
CD28P10747 AL353684.1-201ENST00000622677 1120 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.35□□□□□ -1.71
CD28P10747 AP000550.3-201ENST00000637734 379 ntBASIC4.35□□□□□ -1.71
CD28P10747 AC079776.5-201ENST00000641920 211 ntBASIC4.35□□□□□ -1.71
CD28P10747 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.35□□□□□ -1.71
CD28P10747 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CD28P10747 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CD28P10747 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AC120036.2-201ENST00000509729 1474 ntBASIC4.35□□□□□ -1.71
CD28P10747 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.35□□□□□ -1.71
CD28P10747 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AC083843.2-201ENST00000568248 6253 ntBASIC4.35□□□□□ -1.71
CD28P10747 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD28P10747 AL360270.2-201ENST00000562952 5985 ntBASIC4.34□□□□□ -1.71
CD28P10747 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 Z95331.1-201ENST00000623075 23112 ntBASIC4.34□□□□□ -1.71
CD28P10747 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD28P10747 MIR551A-201ENST00000385042 96 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC005042.1-201ENST00000393397 800 ntBASIC4.34□□□□□ -1.71
CD28P10747 AL121977.1-201ENST00000401636 979 ntBASIC4.34□□□□□ -1.71
CD28P10747 AL354868.1-201ENST00000417077 482 ntBASIC4.34□□□□□ -1.71
CD28P10747 SLC35E1P1-201ENST00000419313 864 ntBASIC4.34□□□□□ -1.71
CD28P10747 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 AL133325.1-201ENST00000421090 382 ntBASIC4.34□□□□□ -1.71
CD28P10747 VN1R21P-201ENST00000426703 765 ntBASIC4.34□□□□□ -1.71
CD28P10747 CRIP1P1-201ENST00000427567 185 ntBASIC4.34□□□□□ -1.71
CD28P10747 NPM1P22-201ENST00000427761 952 ntBASIC4.34□□□□□ -1.71
CD28P10747 GAPDHP58-201ENST00000438477 1006 ntBASIC4.34□□□□□ -1.71
CD28P10747 RPSAP41-201ENST00000439695 860 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC005532.2-201ENST00000467154 373 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 RN7SL727P-201ENST00000482164 296 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.34□□□□□ -1.71
CD28P10747 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 AC093763.2-201ENST00000505334 1223 ntBASIC4.34□□□□□ -1.71
CD28P10747 PGAM1P13-201ENST00000507497 754 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 AC023389.2-201ENST00000580031 955 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 MIR4311-201ENST00000580794 100 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.34□□□□□ -1.71
CD28P10747 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.34□□□□□ -1.71
CD28P10747 AL513327.3-201ENST00000602618 469 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC000068.2-201ENST00000608816 460 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC025574.2-201ENST00000615621 514 ntBASIC4.34□□□□□ -1.71
CD28P10747 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.34□□□□□ -1.71
CD28P10747 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD28P10747 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD28P10747 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD28P10747 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.34□□□□□ -1.72
CD28P10747 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.34□□□□□ -1.72
CD28P10747 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
CD28P10747 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD28P10747 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD28P10747 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.34□□□□□ -1.72
CD28P10747 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD28P10747 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD28P10747 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.72
CD28P10747 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
CD28P10747 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CD28P10747 AL132656.3-201ENST00000606384 1595 ntBASIC4.33□□□□□ -1.72
CD28P10747 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD28P10747 AC053481.2-202ENST00000582394 1500 ntBASIC4.33□□□□□ -1.72
CD28P10747 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CD28P10747 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
CD28P10747 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CD28P10747 RNA5SP91-201ENST00000390902 119 ntBASIC4.33□□□□□ -1.72
CD28P10747 AL390774.1-201ENST00000411924 246 ntBASIC4.33□□□□□ -1.72
CD28P10747 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.33□□□□□ -1.72
CD28P10747 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms