Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FREM3P0C091 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 OR4A43P-201ENST00000532938 908 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.9□□□□□ -1.63
FREM3P0C091 AC084824.2-201ENST00000548906 345 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 AC127381.1-201ENST00000555979 939 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 AC008536.1-201ENST00000602872 669 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 AC009237.13-201ENST00000603193 276 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 AC008115.3-201ENST00000614874 549 ntBASIC4.9□□□□□ -1.63
FREM3P0C091 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.9□□□□□ -1.63
FREM3P0C091 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 OFD1P17-201ENST00000437639 3018 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 ABCA11P-202ENST00000504019 2110 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
FREM3P0C091 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
FREM3P0C091 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 UGT2B24P-201ENST00000514441 1597 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 LINC01963-201ENST00000562038 3148 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 AL353625.1-202ENST00000366273 571 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AL589647.1-201ENST00000402485 466 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 PPIAP9-201ENST00000403866 498 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.89□□□□□ -1.63
FREM3P0C091 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.89□□□□□ -1.63
FREM3P0C091 CNOT7P2-201ENST00000441051 832 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AL596266.1-201ENST00000448132 400 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.89□□□□□ -1.63
FREM3P0C091 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.89□□□□□ -1.63
FREM3P0C091 RPSAP50-201ENST00000481955 852 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 OR8G3P-201ENST00000533406 921 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AC024940.3-201ENST00000538551 316 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.89□□□□□ -1.63
FREM3P0C091 SDR42E1P1-201ENST00000611327 477 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.89□□□□□ -1.63
FREM3P0C091 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 AC016745.2-201ENST00000608834 3443 ntBASIC4.89□□□□□ -1.63
FREM3P0C091 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
FREM3P0C091 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FREM3P0C091 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
FREM3P0C091 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
FREM3P0C091 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.88□□□□□ -1.63
FREM3P0C091 RIMKLBP2-201ENST00000424737 654 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 AC092754.1-201ENST00000472975 479 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 AC058823.1-201ENST00000485315 474 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 RPL37AP8-201ENST00000494116 276 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 SNRPCP2-201ENST00000504370 475 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 ATP5LP3-201ENST00000514223 304 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 AC122688.1-201ENST00000541494 223 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.88□□□□□ -1.63
FREM3P0C091 AC092944.2-201ENST00000605443 889 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 MIR6826-201ENST00000617808 98 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 AC018445.2-201ENST00000622987 260 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.88□□□□□ -1.63
FREM3P0C091 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 AL078621.3-201ENST00000623707 2042 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.88□□□□□ -1.63
FREM3P0C091 AC009962.1-201ENST00000567327 3813 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.88□□□□□ -1.63
FREM3P0C091 AC109446.4-201ENST00000623235 2755 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
FREM3P0C091 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FREM3P0C091 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.88□□□□□ -1.63
FREM3P0C091 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.88□□□□□ -1.63
FREM3P0C091 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.88□□□□□ -1.63
FREM3P0C091 AC073850.1-201ENST00000449243 255 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 RN7SL184P-201ENST00000488308 297 ntBASIC4.88□□□□□ -1.63
FREM3P0C091 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.88□□□□□ -1.63
FREM3P0C091 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.88□□□□□ -1.63
FREM3P0C091 AP003080.1-202ENST00000526526 915 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms