Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC095055.1-201ENST00000603472 1113 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC144521.1-201ENST00000607148 956 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC092574.1-201ENST00000609771 420 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 MIR6820-201ENST00000611508 62 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AP005212.4-201ENST00000614206 710 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 AC074101.1-201ENST00000637861 241 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 MAPK10-350ENST00000641777 965 ntBASIC6.27□□□□□ -1.41
HOXC6P09630 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC6P09630 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC6P09630 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC6P09630 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
HOXC6P09630 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC6P09630 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC6P09630 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 RNU1-43P-201ENST00000365052 165 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 GNG5P2-201ENST00000372054 207 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 AL451142.1-201ENST00000375867 775 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HOXC6P09630 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC6P09630 SEC63P1-201ENST00000425785 1258 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 AC073410.1-201ENST00000435125 589 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 AC097523.2-201ENST00000435551 652 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC6P09630 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 ATP5LP5-201ENST00000483050 299 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 RPS7P6-201ENST00000485777 579 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC6P09630 HMGB1P44-201ENST00000508597 572 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 AP001922.4-201ENST00000526967 290 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 OR8G3P-201ENST00000533406 921 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC6P09630 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC6P09630 HNRNPCP1-201ENST00000556181 766 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 RBM22P1-201ENST00000578589 1214 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC6P09630 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 AP003789.1-201ENST00000617737 605 ntBASIC6.26□□□□□ -1.41
HOXC6P09630 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC6P09630 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
HOXC6P09630 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC6P09630 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
HOXC6P09630 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 AL158152.1-201ENST00000602652 1435 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC6P09630 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC136624.1-201ENST00000400791 413 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 RPS11P7-201ENST00000442125 465 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 RSU1P1-201ENST00000453416 441 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 HIGD1AP8-201ENST00000453927 274 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC6P09630 AL139041.1-201ENST00000605480 610 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC6P09630 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC6P09630 AC073592.7-201ENST00000623659 507 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 AC020923.1-201ENST00000624021 917 ntBASIC6.25□□□□□ -1.41
HOXC6P09630 XKRY2-202ENST00000623874 1581 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms