Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL31P53-201ENST00000457065 348 ntBASIC6.07□□□□□ -1.44
RB1P06400 RPL38P3-201ENST00000484463 213 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.07□□□□□ -1.44
RB1P06400 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.07□□□□□ -1.44
RB1P06400 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.07□□□□□ -1.44
RB1P06400 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.07□□□□□ -1.44
RB1P06400 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.07□□□□□ -1.44
RB1P06400 AC126177.5-201ENST00000549599 178 ntBASIC6.07□□□□□ -1.44
RB1P06400 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.07□□□□□ -1.44
RB1P06400 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.07□□□□□ -1.44
RB1P06400 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.07□□□□□ -1.44
RB1P06400 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.07□□□□□ -1.44
RB1P06400 AC012616.1-201ENST00000600294 197 ntBASIC6.07□□□□□ -1.44
RB1P06400 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC087763.1-201ENST00000603391 286 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC012467.1-201ENST00000607740 256 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC073342.3-201ENST00000624211 193 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC023421.1-201ENST00000590535 1785 ntBASIC6.07□□□□□ -1.44
RB1P06400 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.07□□□□□ -1.44
RB1P06400 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.07□□□□□ -1.44
RB1P06400 AC130304.1-201ENST00000622942 2385 ntBASIC6.07□□□□□ -1.44
RB1P06400 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RB1P06400 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RB1P06400 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 RN7SKP186-201ENST00000365371 303 ntBASIC6.06□□□□□ -1.44
RB1P06400 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 AL136116.2-201ENST00000404020 785 ntBASIC6.06□□□□□ -1.44
RB1P06400 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.06□□□□□ -1.44
RB1P06400 AL390774.1-201ENST00000411924 246 ntBASIC6.06□□□□□ -1.44
RB1P06400 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.06□□□□□ -1.44
RB1P06400 DPPA2P2-201ENST00000418220 897 ntBASIC6.06□□□□□ -1.44
RB1P06400 AL133325.1-201ENST00000421090 382 ntBASIC6.06□□□□□ -1.44
RB1P06400 OR5W1P-201ENST00000423705 938 ntBASIC6.06□□□□□ -1.44
RB1P06400 AL590762.4-201ENST00000425885 253 ntBASIC6.06□□□□□ -1.44
RB1P06400 AC245047.2-201ENST00000441060 530 ntBASIC6.06□□□□□ -1.44
RB1P06400 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 VDAC2P4-201ENST00000452925 711 ntBASIC6.06□□□□□ -1.44
RB1P06400 MTND3P4-201ENST00000453537 303 ntBASIC6.06□□□□□ -1.44
RB1P06400 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 RN7SL447P-201ENST00000494711 245 ntBASIC6.06□□□□□ -1.44
RB1P06400 RN7SKP66-201ENST00000516681 231 ntBASIC6.06□□□□□ -1.44
RB1P06400 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.06□□□□□ -1.44
RB1P06400 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.06□□□□□ -1.44
RB1P06400 AP000676.2-201ENST00000529711 301 ntBASIC6.06□□□□□ -1.44
RB1P06400 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.06□□□□□ -1.44
RB1P06400 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.06□□□□□ -1.44
RB1P06400 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.06□□□□□ -1.44
RB1P06400 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.06□□□□□ -1.44
RB1P06400 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.06□□□□□ -1.44
RB1P06400 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.06□□□□□ -1.44
RB1P06400 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.06□□□□□ -1.44
RB1P06400 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.06□□□□□ -1.44
RB1P06400 AL352984.2-202ENST00000613699 155 ntBASIC6.06□□□□□ -1.44
RB1P06400 AL355974.3-201ENST00000617383 467 ntBASIC6.06□□□□□ -1.44
RB1P06400 AC021422.1-201ENST00000621212 473 ntBASIC6.06□□□□□ -1.44
RB1P06400 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
RB1P06400 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RB1P06400 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RB1P06400 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RB1P06400 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RB1P06400 NAMPTP1-201ENST00000440465 2514 ntBASIC6.05□□□□□ -1.44
RB1P06400 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RB1P06400 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RB1P06400 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 AC007159.1-201ENST00000566529 4706 ntBASIC6.05□□□□□ -1.44
RB1P06400 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RB1P06400 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 OR5T3-201ENST00000303059 1023 ntBASIC6.05□□□□□ -1.44
RB1P06400 RNA5SP305-201ENST00000362665 119 ntBASIC6.05□□□□□ -1.44
RB1P06400 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.05□□□□□ -1.44
RB1P06400 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RB1P06400 RNU1-77P-201ENST00000390868 162 ntBASIC6.05□□□□□ -1.44
RB1P06400 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.05□□□□□ -1.44
RB1P06400 AC136624.1-201ENST00000400791 413 ntBASIC6.05□□□□□ -1.44
RB1P06400 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 RN7SKP279-201ENST00000411383 298 ntBASIC6.05□□□□□ -1.44
RB1P06400 RAB9AP4-201ENST00000415230 609 ntBASIC6.05□□□□□ -1.44
RB1P06400 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.05□□□□□ -1.44
RB1P06400 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.05□□□□□ -1.44
RB1P06400 AC007064.3-201ENST00000422608 359 ntBASIC6.05□□□□□ -1.44
RB1P06400 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.05□□□□□ -1.44
RB1P06400 RPS26P41-201ENST00000450370 284 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms