Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX4O60224 AC091305.2-201ENST00000624049 1576 ntBASIC5.29□□□□□ -1.56
SSX4O60224 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SSX4O60224 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
SSX4O60224 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 AL133243.2-201ENST00000610331 1621 ntBASIC5.28□□□□□ -1.56
SSX4O60224 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 SNORD65-201ENST00000391079 73 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AL031985.1-201ENST00000392713 418 ntBASIC5.28□□□□□ -1.56
SSX4O60224 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 AL132875.1-201ENST00000403623 949 ntBASIC5.28□□□□□ -1.56
SSX4O60224 RNA5SP156-201ENST00000410250 110 ntBASIC5.28□□□□□ -1.56
SSX4O60224 RN7SKP206-201ENST00000410823 293 ntBASIC5.28□□□□□ -1.56
SSX4O60224 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 METTL15P3-201ENST00000415522 1221 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 HMGN2P27-201ENST00000427352 270 ntBASIC5.28□□□□□ -1.56
SSX4O60224 DSTNP5-201ENST00000427921 523 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC007563.3-201ENST00000433233 371 ntBASIC5.28□□□□□ -1.56
SSX4O60224 OR3D1P-201ENST00000438288 955 ntBASIC5.28□□□□□ -1.56
SSX4O60224 RPS23P9-201ENST00000448848 438 ntBASIC5.28□□□□□ -1.56
SSX4O60224 NPM1P19-201ENST00000450070 712 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AL353718.1-201ENST00000451028 517 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC002553.3-201ENST00000453002 341 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX4O60224 AC106872.4-201ENST00000510050 523 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX4O60224 RN7SKP34-201ENST00000516142 244 ntBASIC5.28□□□□□ -1.56
SSX4O60224 RNA5SP271-201ENST00000516700 88 ntBASIC5.28□□□□□ -1.56
SSX4O60224 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX4O60224 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 RPA2P3-201ENST00000533268 770 ntBASIC5.28□□□□□ -1.56
SSX4O60224 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SSX4O60224 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX4O60224 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX4O60224 AC007956.1-201ENST00000555623 542 ntBASIC5.28□□□□□ -1.56
SSX4O60224 ZNF322P1-201ENST00000568013 1209 ntBASIC5.28□□□□□ -1.56
SSX4O60224 LINC00556-201ENST00000569603 412 ntBASIC5.28□□□□□ -1.56
SSX4O60224 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 AC011445.2-201ENST00000599274 173 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC006924.1-201ENST00000610750 559 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC073575.2-201ENST00000614212 627 ntBASIC5.28□□□□□ -1.56
SSX4O60224 AC245014.3-201ENST00000618589 347 ntBASIC5.28□□□□□ -1.56
SSX4O60224 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 AP003400.6-201ENST00000624698 740 ntBASIC5.28□□□□□ -1.56
SSX4O60224 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX4O60224 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 BCORP1-203ENST00000513194 5093 ntBASIC5.28□□□□□ -1.56
SSX4O60224 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX4O60224 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX4O60224 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX4O60224 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 AC002525.1-201ENST00000624392 1622 ntBASIC5.27□□□□□ -1.57
SSX4O60224 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC087752.1-201ENST00000391360 558 ntBASIC5.27□□□□□ -1.57
SSX4O60224 RPL10P10-201ENST00000403509 664 ntBASIC5.27□□□□□ -1.57
SSX4O60224 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 RPS7P8-201ENST00000418311 581 ntBASIC5.27□□□□□ -1.57
SSX4O60224 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 PRUNEP1-201ENST00000425846 705 ntBASIC5.27□□□□□ -1.57
SSX4O60224 RPS7P14-201ENST00000426405 583 ntBASIC5.27□□□□□ -1.57
SSX4O60224 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX4O60224 Z84478.1-201ENST00000438230 1219 ntBASIC5.27□□□□□ -1.57
SSX4O60224 PPIAP10-201ENST00000438675 458 ntBASIC5.27□□□□□ -1.57
SSX4O60224 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX4O60224 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX4O60224 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 RN7SL174P-201ENST00000475578 289 ntBASIC5.27□□□□□ -1.57
SSX4O60224 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.27□□□□□ -1.57
SSX4O60224 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX4O60224 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 AC090958.1-201ENST00000511122 351 ntBASIC5.27□□□□□ -1.57
SSX4O60224 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.27□□□□□ -1.57
SSX4O60224 Y_RNA.710-201ENST00000516975 110 ntBASIC5.27□□□□□ -1.57
SSX4O60224 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.27□□□□□ -1.57
SSX4O60224 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.27□□□□□ -1.57
SSX4O60224 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms