Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC092902.1-201ENST00000486999 259 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC008945.1-201ENST00000505144 499 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 OR4A17P-201ENST00000526032 904 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC104072.1-201ENST00000568817 668 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AP005119.1-201ENST00000580956 292 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
TRIM38O00635 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC068020.1-201ENST00000594215 661 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 BNIP3P40-201ENST00000596017 556 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 SNX6P1-201ENST00000601728 1224 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC130352.1-201ENST00000602979 661 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC027334.1-201ENST00000603257 310 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC018645.2-201ENST00000609151 472 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC016597.2-201ENST00000613256 341 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC009269.6-201ENST00000621778 588 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AC010872.1-201ENST00000624225 675 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 AL121768.1-201ENST00000613917 2544 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM38O00635 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM38O00635 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM38O00635 CASC19-281ENST00000642118 1554 ntBASIC6.06□□□□□ -1.44
TRIM38O00635 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TRIM38O00635 AC015799.1-201ENST00000622996 3122 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC007342.7-201ENST00000624610 2337 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC096921.2-201ENST00000561507 1916 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM38O00635 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 TCP1P3-201ENST00000414406 1498 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRIM38O00635 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 NPM1P37-201ENST00000403105 874 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 RNA5SP156-201ENST00000410250 110 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC245096.1-201ENST00000413104 546 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM38O00635 AL365220.1-201ENST00000432923 399 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 AL161636.2-201ENST00000445179 927 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM38O00635 AL161722.1-201ENST00000446972 1032 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 UBFD1P1-201ENST00000473259 814 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 RN7SL273P-201ENST00000481561 299 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 AC010460.2-201ENST00000509054 677 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM38O00635 RNA5SP400-201ENST00000517155 111 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TRIM38O00635 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 AC027544.3-201ENST00000535082 757 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.05□□□□□ -1.44
TRIM38O00635 AC027216.1-201ENST00000577726 685 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.05□□□□□ -1.44
TRIM38O00635 CBX3P2-202ENST00000583365 535 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 AC090236.2-201ENST00000587933 1101 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM38O00635 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 AP000484.1-201ENST00000620067 1252 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM38O00635 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM38O00635 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.05□□□□□ -1.44
TRIM38O00635 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 AC083837.1-201ENST00000565297 2994 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 RBMY1HP-201ENST00000382759 1389 ntBASIC6.05□□□□□ -1.44
TRIM38O00635 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
TRIM38O00635 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 WDR95P-201ENST00000425638 1542 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 AC025470.1-201ENST00000510053 2032 ntBASIC6.04□□□□□ -1.44
TRIM38O00635 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
TRIM38O00635 KYNUP3-201ENST00000574386 1341 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms