Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 GPS2P1-201ENST00000411761 986 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 EEF1B2P8-201ENST00000414101 671 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC239798.3-201ENST00000454459 408 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC091912.1-201ENST00000511351 248 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 SNORA43.3-201ENST00000517240 103 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC009237.13-201ENST00000603193 276 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 PPATP2-201ENST00000605635 508 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC010632.3-201ENST00000611377 369 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 uc_338.7-201ENST00000621834 124 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 OR13C1P-202ENST00000641378 2919 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC138627.1-204ENST00000641894 765 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 AC008691.1-209ENST00000642094 814 ntBASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.61□□□□□ -1.51
LRRC40Q9H9A6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC245100.2-201ENST00000454544 1679 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 LYPLA1P3-201ENST00000402650 695 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC093155.2-201ENST00000420734 937 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 RPL34P3-201ENST00000421454 338 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 VDAC2P4-201ENST00000452925 711 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AP000547.1-201ENST00000454360 617 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 RPSAP51-201ENST00000497462 645 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SNORA70.11-201ENST00000515987 138 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SNORA70.13-201ENST00000516116 138 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 CYCSP22-201ENST00000517555 339 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 MRPS21P7-201ENST00000566937 238 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC019322.1-201ENST00000571869 389 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC002069.2-201ENST00000603580 883 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL713998.2-201ENST00000604538 1198 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL022394.1-201ENST00000606979 292 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC022960.2-201ENST00000616300 666 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AC099654.6-201ENST00000636487 512 ntBASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LRRC40Q9H9A6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 YES1P1-201ENST00000418510 1628 ntBASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 AC114786.1-201ENST00000512892 1415 ntBASIC5.59□□□□□ -1.51
LRRC40Q9H9A6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms