Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.01□□□□□ -1.45
TRIM54Q9BYV2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC239868.2-201ENST00000564237 4527 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL133243.2-201ENST00000610331 1621 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC011416.1-201ENST00000514947 1732 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 RNU6-1005P-201ENST00000384519 107 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 ATF1P1-201ENST00000406040 927 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 RNU4-74P-201ENST00000411280 161 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 HMGB3P5-201ENST00000428894 612 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 PSMD10P2-201ENST00000432890 672 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 LINC00328-2P-201ENST00000436585 219 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC069540.1-201ENST00000446320 988 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AP002453.1-201ENST00000492327 668 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC008945.1-201ENST00000505144 499 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 RNU6-276P-201ENST00000516114 96 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC087888.1-201ENST00000550884 1254 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 MTATP6P24-201ENST00000576835 677 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 SNORD39.2-201ENST00000579995 76 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 SNX6P1-201ENST00000601728 1224 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL022067.1-201ENST00000602426 454 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC004890.3-201ENST00000605566 1095 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 RPSAP75-201ENST00000605848 301 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC022106.1-201ENST00000612834 766 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AL078595.3-201ENST00000623815 1166 ntBASIC6□□□□□ -1.45
TRIM54Q9BYV2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
TRIM54Q9BYV2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM54Q9BYV2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AL442128.2-201ENST00000620246 1824 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AL121768.1-201ENST00000613917 2544 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AC024587.1-201ENST00000505925 2157 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 RNA5SP375-201ENST00000362975 119 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 SNORD1C-201ENST00000363315 78 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 SNORD56.4-201ENST00000363883 71 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AC007618.1-201ENST00000366455 732 ntBASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM54Q9BYV2 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms