Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPL21P18-201ENST00000469899 480 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 CYCSP20-201ENST00000473154 315 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 RPS17P11-201ENST00000474297 293 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 RN7SL413P-201ENST00000482700 297 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 RPL5P23-201ENST00000496040 868 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 SUMO1P1-201ENST00000497904 306 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC138409.2-202ENST00000507274 458 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 CYP4F27P-201ENST00000514557 494 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 RNU6-276P-201ENST00000516114 96 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 BUD31P1-201ENST00000521828 359 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC138832.1-201ENST00000522871 556 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC107958.1-201ENST00000556576 290 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 TPRX1P1-201ENST00000557620 319 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 MT1CP-201ENST00000567054 174 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC025283.1-201ENST00000572039 734 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC008751.2-201ENST00000597885 980 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AL022067.1-201ENST00000602426 454 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC069234.4-201ENST00000621276 412 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 AC079753.1-201ENST00000623243 3868 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 ZNF90P1-201ENST00000480493 1951 ntBASIC5.64□□□□□ -1.51
SNX18Q96RF0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SNX18Q96RF0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SNX18Q96RF0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 SNORD35A-201ENST00000363389 86 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 SNORA11.3-201ENST00000408471 128 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CDY17P-201ENST00000414121 1282 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 MTCO2P21-201ENST00000419780 677 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CDY8P-201ENST00000428380 1279 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 OR6R1P-201ENST00000431838 940 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 BX119904.1-201ENST00000432026 348 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 MTCYBP31-201ENST00000438855 1122 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 RPL5P25-201ENST00000441148 775 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 TIMM8BP2-201ENST00000445940 251 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CDY20P-201ENST00000447528 1279 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 OSTCP1-201ENST00000455507 450 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 RARRES2P3-201ENST00000457739 473 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 RPSAP39-201ENST00000467439 883 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 RN7SL714P-201ENST00000487050 298 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC021106.1-201ENST00000509020 1058 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC093816.1-201ENST00000515076 913 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 RNA5SP473-201ENST00000516402 125 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC020937.1-201ENST00000519677 1013 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.63□□□□□ -1.51
SNX18Q96RF0 MIR3154-201ENST00000577829 84 ntBASIC5.63□□□□□ -1.51
SNX18Q96RF0 AC124283.4-201ENST00000581815 456 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms