Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NACAP5-201ENST00000509863 636 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC113191.1-201ENST00000517759 403 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 OR10D4P-201ENST00000525892 951 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CASP1P2-201ENST00000526830 1258 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CD24P2-201ENST00000565486 219 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC068768.2-201ENST00000602352 343 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC145423.1-201ENST00000605712 336 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 NANOGP3-201ENST00000605855 286 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC007786.3-201ENST00000615154 596 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 RPL23AP61-201ENST00000623642 466 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC002525.1-201ENST00000624392 1622 ntBASIC5.52□□□□□ -1.53
VPS33AQ96AX1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.52□□□□□ -1.53
VPS33AQ96AX1 AC093775.1-201ENST00000624154 1868 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC008627.1-201ENST00000517511 1704 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 SETP10-201ENST00000424368 814 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AL627224.1-201ENST00000448334 444 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC037198.2-201ENST00000478845 733 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 HAUS1P1-201ENST00000505275 832 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC021146.7-201ENST00000509604 775 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 BTG4P1-201ENST00000510421 183 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC135803.1-201ENST00000608748 565 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AL138693.1-201ENST00000622219 129 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC021106.3-201ENST00000623925 531 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 AC007603.3-201ENST00000636915 979 ntBASIC5.51□□□□□ -1.53
VPS33AQ96AX1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS33AQ96AX1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL096711.1-201ENST00000404780 554 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 RPS26P13-201ENST00000419030 330 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC006065.1-201ENST00000422539 802 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC099782.1-201ENST00000425889 474 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 GAPDHP59-201ENST00000435908 267 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms