Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RTN4IP1Q8WWV3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RTN4IP1Q8WWV3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RTN4IP1Q8WWV3 AC104623.2-202ENST00000623477 4002 ntBASIC4.61□□□□□ -1.67
RTN4IP1Q8WWV3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
RTN4IP1Q8WWV3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 RNA5SP30-201ENST00000365552 115 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 SNORA48.4-201ENST00000391089 134 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 RPS6P23-201ENST00000413224 722 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC127526.2-201ENST00000426436 775 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 TCEA1P3-201ENST00000443005 880 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 SERPINA7P1-201ENST00000443077 631 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC016772.1-201ENST00000444170 1261 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 NDUFA5P5-201ENST00000468361 342 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC094085.1-201ENST00000468914 584 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 RPS3AP15-201ENST00000483874 781 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 COX6B1P2-201ENST00000489624 230 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 IGLV3-24-201ENST00000517477 197 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC020937.1-201ENST00000519677 1013 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 TRIM51DP-201ENST00000529746 596 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 HMGB1P42-201ENST00000532126 553 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 NANOGNBP2-201ENST00000544753 553 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC106730.2-201ENST00000566641 540 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC063977.5-201ENST00000601044 974 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC009237.13-201ENST00000603193 276 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL390318.1-201ENST00000624564 687 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC087565.3-203ENST00000641018 837 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC106872.5-201ENST00000508856 1416 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC100757.1-201ENST00000616872 1835 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 AC011755.1-201ENST00000623763 2049 ntBASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RTN4IP1Q8WWV3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 MT-RNR2-201ENST00000387347 1559 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 SLC20A1P1-201ENST00000413906 956 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 NENFP1-201ENST00000419476 466 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 MGAT2P2-201ENST00000427194 797 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AL445665.1-202ENST00000452436 324 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AC087672.1-201ENST00000479876 766 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 ENPP7P11-201ENST00000505915 627 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 DUTP7-201ENST00000507982 486 ntBASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.59□□□□□ -1.67
RTN4IP1Q8WWV3 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms