Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 AP005435.3-201ENST00000531260 3198 ntBASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC12Q8WUD4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 U3.28-201ENST00000391249 210 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 CHEK2P5-201ENST00000423877 246 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AL672138.1-201ENST00000450604 1015 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 RN7SL101P-201ENST00000496350 279 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 SCARNA16.4-201ENST00000516956 187 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 MIR8080-201ENST00000622224 89 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CCDC12Q8WUD4 GVINP1-202ENST00000531871 7271 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 SNORA70.6-201ENST00000383934 134 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 RN7SKP206-201ENST00000410823 293 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 NAP1L4P2-201ENST00000425958 899 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC012075.1-201ENST00000436549 580 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC105399.1-202ENST00000447303 205 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC021106.1-201ENST00000509020 1058 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC106872.4-201ENST00000510050 523 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC027216.1-201ENST00000577726 685 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 FAM72A-208ENST00000607379 1139 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 MIR6133-201ENST00000617057 108 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AL049767.1-202ENST00000637826 242 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AL078595.2-201ENST00000605309 1780 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AL022311.1-201ENST00000623726 19416 ntBASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC12Q8WUD4 AC007938.2-201ENST00000604666 2634 ntBASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 AL359715.3-201ENST00000569267 2123 ntBASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 AC104964.3-201ENST00000606115 2860 ntBASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC12Q8WUD4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms