Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AP001284.1-201ENST00000528393 2118 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 AC130364.2-201ENST00000528639 604 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 IGBP1P1-201ENST00000554337 1009 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 AC027216.1-201ENST00000577726 685 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 MIR3614-201ENST00000581261 86 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 uc_338.7-201ENST00000621834 124 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 RPS2P45-201ENST00000469997 2057 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 LINC02019-201ENST00000608605 2060 ntBASIC5.25□□□□□ -1.57
HMGCS1Q01581 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGCS1Q01581 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
HMGCS1Q01581 AL078621.3-201ENST00000623707 2042 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 RN7SKP6-201ENST00000364795 319 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 MIR551A-201ENST00000385042 96 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AL031985.1-201ENST00000392713 418 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 SNORA11.3-201ENST00000408471 128 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 HYALP1-201ENST00000417674 1279 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 DPPA2P2-201ENST00000418220 897 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC117434.1-201ENST00000419971 836 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC093155.2-201ENST00000420734 937 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AL450996.1-201ENST00000445574 1202 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 RPL31P15-201ENST00000449770 338 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AL450023.1-201ENST00000450868 751 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC109481.1-201ENST00000509173 282 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC109464.1-201ENST00000511091 819 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 SNORA11.6-201ENST00000619030 128 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC127024.6-201ENST00000621598 424 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AL034549.2-201ENST00000618285 3373 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 RNF19BPY-201ENST00000458209 1550 ntBASIC5.24□□□□□ -1.57
HMGCS1Q01581 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGCS1Q01581 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMGCS1Q01581 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGCS1Q01581 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGCS1Q01581 SNORA16A-201ENST00000384342 137 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms