Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC011933.2-201ENST00000578539 2790 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC239868.2-201ENST00000564237 4527 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDK3Q00526 MTHFD2P5-201ENST00000320415 844 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 GAPDHP24-201ENST00000328713 983 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 RN7SKP160-201ENST00000363804 340 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 SNORA70.9-201ENST00000384370 135 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 AC242426.1-201ENST00000435270 960 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 H3F3BP1-201ENST00000440551 403 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC025181.1-201ENST00000477507 416 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 PDCL3P4-201ENST00000489621 720 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK3Q00526 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK3Q00526 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDK3Q00526 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC007225.2-201ENST00000562529 256 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC015720.2-201ENST00000567709 334 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 MIR4420-201ENST00000583944 77 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC005520.3-201ENST00000602874 370 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC079395.2-201ENST00000610982 737 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 HPVC1-201ENST00000629899 1198 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 CFTRP2-201ENST00000634304 199 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK3Q00526 AC087565.3-202ENST00000642085 1603 ntBASIC5.55□□□□□ -1.52
CDK3Q00526 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK3Q00526 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDK3Q00526 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK3Q00526 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK3Q00526 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK3Q00526 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK3Q00526 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK3Q00526 RN7SKP28-201ENST00000364770 305 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 RNU4-2-201ENST00000365668 141 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 RNU6-152P-201ENST00000384037 107 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AL391361.1-201ENST00000405580 489 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AL358178.1-201ENST00000407698 397 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 AL590623.1-201ENST00000427864 105 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 KRT8P51-201ENST00000438938 274 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC019185.1-201ENST00000442718 389 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AL500527.1-201ENST00000448532 255 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK3Q00526 MORF4L1P4-201ENST00000450245 976 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 RPL35AP19-201ENST00000469425 329 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK3Q00526 GOLGA5P1-201ENST00000507317 980 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 SEC11B-201ENST00000518383 499 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK3Q00526 OR7E10P-201ENST00000526420 991 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK3Q00526 MIR3176-201ENST00000582210 90 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK3Q00526 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 AC012616.1-201ENST00000600294 197 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK3Q00526 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 QTRT1P1-201ENST00000604344 1078 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC073111.2-201ENST00000605657 1075 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC025574.2-201ENST00000615621 514 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK3Q00526 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK3Q00526 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK3Q00526 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 CASC19-248ENST00000641674 1356 ntBASIC5.54□□□□□ -1.52
CDK3Q00526 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK3Q00526 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK3Q00526 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK3Q00526 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK3Q00526 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms