Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNF10P1-201ENST00000418589 369 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.34□□□□□ -1.39
CCNA1P78396 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.34□□□□□ -1.39
CCNA1P78396 AC093655.2-201ENST00000425735 631 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.34□□□□□ -1.39
CCNA1P78396 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCNA1P78396 RPS7P6-201ENST00000485777 579 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CCNA1P78396 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CCNA1P78396 NDUFB5P1-201ENST00000508134 564 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 TOMM22P4-201ENST00000511318 336 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 RN7SKP66-201ENST00000516681 231 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 SCARNA16.4-201ENST00000516956 187 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 PMS2P3-207ENST00000529061 717 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 AC139697.1-201ENST00000548429 745 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.34□□□□□ -1.39
CCNA1P78396 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.34□□□□□ -1.39
CCNA1P78396 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.34□□□□□ -1.39
CCNA1P78396 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.34□□□□□ -1.39
CCNA1P78396 AP002799.1-201ENST00000623552 423 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 AC073342.3-201ENST00000624211 193 ntBASIC6.34□□□□□ -1.39
CCNA1P78396 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
CCNA1P78396 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.34□□□□□ -1.39
CCNA1P78396 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.34□□□□□ -1.39
CCNA1P78396 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.34□□□□□ -1.4
CCNA1P78396 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.34□□□□□ -1.4
CCNA1P78396 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
CCNA1P78396 TTC41P-205ENST00000551270 3963 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC112255.1-201ENST00000624070 2493 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 U3.2-201ENST00000362981 210 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 RPL11P3-201ENST00000395256 523 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 RN7SKP216-201ENST00000411050 312 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 AL139128.1-201ENST00000413921 941 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 AL590762.4-201ENST00000425885 253 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.33□□□□□ -1.4
CCNA1P78396 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 RPS23P9-201ENST00000448848 438 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 AC073850.1-201ENST00000449243 255 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC006116.3-201ENST00000592968 361 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 AL513327.3-201ENST00000602618 469 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 TAS2R6P-201ENST00000605022 826 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.33□□□□□ -1.4
CCNA1P78396 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCNA1P78396 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.33□□□□□ -1.4
CCNA1P78396 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.33□□□□□ -1.4
CCNA1P78396 AC239868.2-201ENST00000564237 4527 ntBASIC6.33□□□□□ -1.4
CCNA1P78396 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCNA1P78396 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCNA1P78396 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCNA1P78396 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 AC023421.1-201ENST00000590535 1785 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCNA1P78396 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
CCNA1P78396 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCNA1P78396 RNU1-43P-201ENST00000365052 165 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 RNA5SP91-201ENST00000390902 119 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 RPL7P58-201ENST00000402913 758 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 RBMY2KP-201ENST00000418221 992 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.32□□□□□ -1.4
CCNA1P78396 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.32□□□□□ -1.4
CCNA1P78396 TMEM183AP1-205ENST00000432739 290 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AL596266.1-201ENST00000448132 400 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 RPL7P61-201ENST00000451721 751 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AL035090.1-201ENST00000454835 332 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AC091685.2-201ENST00000454924 864 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 PPP1R11P1-201ENST00000486095 376 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 SUMO2P4-201ENST00000504193 276 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 AC138409.2-202ENST00000507274 458 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 HMGB1P44-201ENST00000508597 572 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.32□□□□□ -1.4
CCNA1P78396 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.32□□□□□ -1.4
CCNA1P78396 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.32□□□□□ -1.4
CCNA1P78396 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.32□□□□□ -1.4
CCNA1P78396 MIR6748-201ENST00000610433 71 ntBASIC6.32□□□□□ -1.4
CCNA1P78396 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCNA1P78396 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms