Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
UBA52P62987 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.85□□□□□ -1.63
UBA52P62987 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.85□□□□□ -1.63
UBA52P62987 AL049874.2-201ENST00000492636 288 ntBASIC4.85□□□□□ -1.63
UBA52P62987 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.85□□□□□ -1.63
UBA52P62987 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.85□□□□□ -1.63
UBA52P62987 AC002456.2-201ENST00000509356 380 ntBASIC4.85□□□□□ -1.63
UBA52P62987 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UBA52P62987 OR4A17P-201ENST00000526032 904 ntBASIC4.85□□□□□ -1.63
UBA52P62987 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.85□□□□□ -1.63
UBA52P62987 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.85□□□□□ -1.63
UBA52P62987 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
UBA52P62987 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.85□□□□□ -1.63
UBA52P62987 MIR3936-201ENST00000584304 110 ntBASIC4.85□□□□□ -1.63
UBA52P62987 OR7E18P-201ENST00000592589 702 ntBASIC4.85□□□□□ -1.63
UBA52P62987 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBA52P62987 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.85□□□□□ -1.63
UBA52P62987 AC026367.3-201ENST00000619032 590 ntBASIC4.85□□□□□ -1.63
UBA52P62987 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
UBA52P62987 MIR193BHG-214ENST00000641765 509 ntBASIC4.85□□□□□ -1.63
UBA52P62987 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBA52P62987 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBA52P62987 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
UBA52P62987 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.85□□□□□ -1.63
UBA52P62987 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBA52P62987 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
UBA52P62987 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
UBA52P62987 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBA52P62987 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UBA52P62987 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UBA52P62987 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.84□□□□□ -1.63
UBA52P62987 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UBA52P62987 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
UBA52P62987 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 AC011933.2-201ENST00000578539 2790 ntBASIC4.84□□□□□ -1.63
UBA52P62987 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.84□□□□□ -1.63
UBA52P62987 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.84□□□□□ -1.63
UBA52P62987 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 AC092681.1-201ENST00000297369 291 ntBASIC4.84□□□□□ -1.63
UBA52P62987 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 EI24P3-201ENST00000399046 1062 ntBASIC4.84□□□□□ -1.63
UBA52P62987 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.84□□□□□ -1.63
UBA52P62987 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.84□□□□□ -1.63
UBA52P62987 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.84□□□□□ -1.63
UBA52P62987 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.84□□□□□ -1.63
UBA52P62987 SUMO2P3-201ENST00000438311 288 ntBASIC4.84□□□□□ -1.63
UBA52P62987 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.84□□□□□ -1.63
UBA52P62987 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.84□□□□□ -1.63
UBA52P62987 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 SEPT10P1-201ENST00000517342 1162 ntBASIC4.84□□□□□ -1.63
UBA52P62987 IGLV2-28-201ENST00000520681 304 ntBASIC4.84□□□□□ -1.63
UBA52P62987 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.84□□□□□ -1.63
UBA52P62987 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
UBA52P62987 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBA52P62987 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.84□□□□□ -1.63
UBA52P62987 AL589674.2-201ENST00000604304 337 ntBASIC4.84□□□□□ -1.63
UBA52P62987 FAM27E4-201ENST00000605259 342 ntBASIC4.84□□□□□ -1.63
UBA52P62987 HIRAP1-201ENST00000605318 787 ntBASIC4.84□□□□□ -1.63
UBA52P62987 AP000864.1-201ENST00000609424 650 ntBASIC4.84□□□□□ -1.63
UBA52P62987 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.84□□□□□ -1.63
UBA52P62987 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.63
UBA52P62987 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.84□□□□□ -1.63
UBA52P62987 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBA52P62987 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBA52P62987 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
UBA52P62987 AC093849.1-201ENST00000563631 2209 ntBASIC4.84□□□□□ -1.64
UBA52P62987 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBA52P62987 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBA52P62987 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBA52P62987 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 AC068870.3-201ENST00000625077 2536 ntBASIC4.83□□□□□ -1.64
UBA52P62987 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 U3.28-201ENST00000391249 210 ntBASIC4.83□□□□□ -1.64
UBA52P62987 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 AC093155.2-201ENST00000420734 937 ntBASIC4.83□□□□□ -1.64
UBA52P62987 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms