Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.71□□□□□ -1.5
SUMO3P55854 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 FAM183DP-201ENST00000421987 399 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC099782.1-201ENST00000425889 474 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC094019.1-201ENST00000434678 472 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 LINC00328-2P-201ENST00000436585 219 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC079922.1-201ENST00000443291 359 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SUMO3P55854 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.71□□□□□ -1.5
SUMO3P55854 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC023050.1-201ENST00000498198 304 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC119751.1-201ENST00000513357 765 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.71□□□□□ -1.5
SUMO3P55854 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC139103.1-201ENST00000534696 1030 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 OR4H6P-201ENST00000563771 921 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 MIR3189-201ENST00000578735 73 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 MIR548Y-201ENST00000582739 110 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.71□□□□□ -1.5
SUMO3P55854 AC012676.3-201ENST00000614983 479 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC006386.1-201ENST00000619436 415 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AP000484.1-201ENST00000620067 1252 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.71□□□□□ -1.5
SUMO3P55854 MIR6813-201ENST00000621638 56 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 OR8A1-204ENST00000642111 1145 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 AC099786.3-201ENST00000565735 1410 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SUMO3P55854 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 CIR1P2-201ENST00000514821 1342 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.71□□□□□ -1.5
SUMO3P55854 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.71□□□□□ -1.5
SUMO3P55854 CASC19-284ENST00000642142 1868 ntBASIC5.71□□□□□ -1.5
SUMO3P55854 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SUMO3P55854 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
SUMO3P55854 AC022034.1-201ENST00000512867 2156 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.7□□□□□ -1.5
SUMO3P55854 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SUMO3P55854 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 AL442128.2-201ENST00000620246 1824 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 TMCC1P1-201ENST00000518897 1980 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 RNA5SP346-201ENST00000363541 121 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 RN7SKP222-201ENST00000410651 315 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 AC116036.1-201ENST00000412199 367 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.7□□□□□ -1.5
SUMO3P55854 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.7□□□□□ -1.5
SUMO3P55854 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SUMO3P55854 AC246680.2-201ENST00000422106 389 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.7□□□□□ -1.5
SUMO3P55854 AC092634.2-201ENST00000428146 1010 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 FTH1P16-201ENST00000435241 552 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.7□□□□□ -1.5
SUMO3P55854 AC096632.2-201ENST00000438139 1239 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 PPIAP10-201ENST00000438675 458 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 AL645936.1-201ENST00000441979 518 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 Z73417.1-201ENST00000447373 778 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.7□□□□□ -1.5
SUMO3P55854 RPL7P48-201ENST00000461513 746 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 RN7SL221P-201ENST00000466190 281 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 PSAT1P4-201ENST00000466500 526 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 MTCO3P35-201ENST00000485582 781 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.7□□□□□ -1.5
SUMO3P55854 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.7□□□□□ -1.5
SUMO3P55854 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.7□□□□□ -1.5
SUMO3P55854 AP001000.1-201ENST00000526843 742 ntBASIC5.7□□□□□ -1.5
SUMO3P55854 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SUMO3P55854 AP001858.2-201ENST00000536213 601 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms