Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.24□□□□□ -1.41
COPB1P53618 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AC023158.1-201ENST00000561632 1025 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AGGF1P7-201ENST00000562369 913 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC083837.1-201ENST00000565297 2994 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 AC245884.10-201ENST00000597355 337 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 AC073111.2-201ENST00000605657 1075 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC015982.1-201ENST00000608113 465 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC018690.1-201ENST00000608144 626 ntBASIC6.24□□□□□ -1.41
COPB1P53618 AC018645.2-201ENST00000609151 472 ntBASIC6.24□□□□□ -1.41
COPB1P53618 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.24□□□□□ -1.41
COPB1P53618 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.24□□□□□ -1.41
COPB1P53618 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COPB1P53618 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.24□□□□□ -1.41
COPB1P53618 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.23□□□□□ -1.41
COPB1P53618 AC068870.1-201ENST00000563737 2455 ntBASIC6.23□□□□□ -1.41
COPB1P53618 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COPB1P53618 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 OR4F13P-202ENST00000560066 2054 ntBASIC6.23□□□□□ -1.41
COPB1P53618 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COPB1P53618 MRPL53P1-201ENST00000414323 319 ntBASIC6.23□□□□□ -1.41
COPB1P53618 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.23□□□□□ -1.41
COPB1P53618 AC023141.6-201ENST00000429418 337 ntBASIC6.23□□□□□ -1.41
COPB1P53618 MTND4LP14-201ENST00000429447 288 ntBASIC6.23□□□□□ -1.41
COPB1P53618 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 RNF2P1-201ENST00000442955 1010 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.23□□□□□ -1.41
COPB1P53618 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.23□□□□□ -1.41
COPB1P53618 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 CFL1P4-201ENST00000451536 498 ntBASIC6.23□□□□□ -1.41
COPB1P53618 TVP23BP2-201ENST00000455082 615 ntBASIC6.23□□□□□ -1.41
COPB1P53618 MTND2P30-201ENST00000456663 382 ntBASIC6.23□□□□□ -1.41
COPB1P53618 FCF1P6-201ENST00000456841 595 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC094085.1-201ENST00000468914 584 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC092902.1-201ENST00000486999 259 ntBASIC6.23□□□□□ -1.41
COPB1P53618 RN7SL193P-201ENST00000491708 276 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.23□□□□□ -1.41
COPB1P53618 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 AC016550.1-201ENST00000505348 785 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC074255.1-201ENST00000511259 501 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.23□□□□□ -1.41
COPB1P53618 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.23□□□□□ -1.41
COPB1P53618 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 AC005726.4-201ENST00000582858 458 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC090236.2-201ENST00000587933 1101 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.23□□□□□ -1.41
COPB1P53618 AC005776.1-201ENST00000603164 290 ntBASIC6.23□□□□□ -1.41
COPB1P53618 BX323046.1-201ENST00000610145 535 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC016597.2-201ENST00000613256 341 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC245014.3-201ENST00000618589 347 ntBASIC6.23□□□□□ -1.41
COPB1P53618 AC022960.3-201ENST00000619794 441 ntBASIC6.23□□□□□ -1.41
COPB1P53618 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COPB1P53618 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
COPB1P53618 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COPB1P53618 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COPB1P53618 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.23□□□□□ -1.41
COPB1P53618 AC016745.2-201ENST00000608834 3443 ntBASIC6.22□□□□□ -1.41
COPB1P53618 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.22□□□□□ -1.41
COPB1P53618 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COPB1P53618 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.22□□□□□ -1.41
COPB1P53618 RSL24D1P1-201ENST00000404972 493 ntBASIC6.22□□□□□ -1.41
COPB1P53618 RNA5SP431-201ENST00000410312 120 ntBASIC6.22□□□□□ -1.41
COPB1P53618 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.22□□□□□ -1.41
COPB1P53618 RNF10P1-201ENST00000418589 369 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms