Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 HMGN1P36-201ENST00000446623 298 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AL157884.3-201ENST00000448273 1184 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.53□□□□□ -1.52
RAB28P51157 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.53□□□□□ -1.52
RAB28P51157 RN7SL174P-201ENST00000475578 289 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC087672.1-201ENST00000479876 766 ntBASIC5.53□□□□□ -1.52
RAB28P51157 OR11I1P-201ENST00000486033 954 ntBASIC5.53□□□□□ -1.52
RAB28P51157 PDCL3P4-201ENST00000489621 720 ntBASIC5.53□□□□□ -1.52
RAB28P51157 DUTP1-201ENST00000493631 470 ntBASIC5.53□□□□□ -1.52
RAB28P51157 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB28P51157 AC106872.4-201ENST00000510050 523 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.53□□□□□ -1.52
RAB28P51157 AC010547.6-201ENST00000571789 193 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.53□□□□□ -1.52
RAB28P51157 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.53□□□□□ -1.52
RAB28P51157 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
RAB28P51157 MIR6862-1-201ENST00000613016 70 ntBASIC5.53□□□□□ -1.52
RAB28P51157 MIR6862-2-201ENST00000614755 70 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC126175.1-201ENST00000617041 758 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AC015660.5-201ENST00000623238 564 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AL390318.1-201ENST00000624564 687 ntBASIC5.53□□□□□ -1.52
RAB28P51157 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.53□□□□□ -1.52
RAB28P51157 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB28P51157 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB28P51157 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RAB28P51157 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAB28P51157 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAB28P51157 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RAB28P51157 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAB28P51157 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.53□□□□□ -1.52
RAB28P51157 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RAB28P51157 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAB28P51157 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 AC007842.1-201ENST00000597336 2039 ntBASIC5.52□□□□□ -1.53
RAB28P51157 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAB28P51157 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 RNA5SP30-201ENST00000365552 115 ntBASIC5.52□□□□□ -1.53
RAB28P51157 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 GAPDHP15-201ENST00000398586 975 ntBASIC5.52□□□□□ -1.53
RAB28P51157 RPL10P10-201ENST00000403509 664 ntBASIC5.52□□□□□ -1.53
RAB28P51157 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 RNU2-22P-201ENST00000411266 212 ntBASIC5.52□□□□□ -1.53
RAB28P51157 NENFP1-201ENST00000419476 466 ntBASIC5.52□□□□□ -1.53
RAB28P51157 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.52□□□□□ -1.53
RAB28P51157 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 FAM204CP-201ENST00000424489 642 ntBASIC5.52□□□□□ -1.53
RAB28P51157 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAB28P51157 AC017019.1-201ENST00000426129 261 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AL590623.1-201ENST00000427864 105 ntBASIC5.52□□□□□ -1.53
RAB28P51157 BX679664.2-201ENST00000439282 283 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AC064862.4-201ENST00000442180 334 ntBASIC5.52□□□□□ -1.53
RAB28P51157 RPL36AP39-201ENST00000445859 318 ntBASIC5.52□□□□□ -1.53
RAB28P51157 MTND2P3-201ENST00000452458 470 ntBASIC5.52□□□□□ -1.53
RAB28P51157 RPL12P39-201ENST00000455456 496 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 AC067904.2-201ENST00000517322 1283 ntBASIC5.52□□□□□ -1.53
RAB28P51157 MRPS16P1-201ENST00000523462 412 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.52□□□□□ -1.53
RAB28P51157 AC012414.2-201ENST00000559474 187 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.52□□□□□ -1.53
RAB28P51157 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB28P51157 AL451049.1-201ENST00000608672 497 ntBASIC5.52□□□□□ -1.53
RAB28P51157 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 AC021422.1-201ENST00000621212 473 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AC004808.2-201ENST00000627965 773 ntBASIC5.52□□□□□ -1.53
RAB28P51157 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB28P51157 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB28P51157 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB28P51157 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.51□□□□□ -1.53
RAB28P51157 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RAB28P51157 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB28P51157 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RAB28P51157 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.51□□□□□ -1.53
RAB28P51157 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RAB28P51157 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RAB28P51157 RNA5SP46-201ENST00000362370 120 ntBASIC5.51□□□□□ -1.53
RAB28P51157 MIR421-201ENST00000365696 85 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms