Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC011270.1-201ENST00000558606 583 ntBASIC7.02□□□□□ -1.29
MRE11P49959 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.02□□□□□ -1.29
MRE11P49959 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.02□□□□□ -1.29
MRE11P49959 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 AC010503.3-201ENST00000594355 540 ntBASIC7.02□□□□□ -1.29
MRE11P49959 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC015712.7-201ENST00000615211 635 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.02□□□□□ -1.29
MRE11P49959 AC009159.2-201ENST00000617603 606 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC132825.8-201ENST00000640783 297 ntBASIC7.02□□□□□ -1.29
MRE11P49959 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.01□□□□□ -1.29
MRE11P49959 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 MAPK10-328ENST00000641553 4009 ntBASIC7.01□□□□□ -1.29
MRE11P49959 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
MRE11P49959 TMSB4XP4-201ENST00000323496 618 ntBASIC7.01□□□□□ -1.29
MRE11P49959 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 RNU4-39P-201ENST00000362455 127 ntBASIC7.01□□□□□ -1.29
MRE11P49959 RNA5SP242-201ENST00000364171 118 ntBASIC7.01□□□□□ -1.29
MRE11P49959 RNA5SP485-201ENST00000365053 119 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MIR188-201ENST00000385034 86 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 AC079809.1-201ENST00000415468 276 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.01□□□□□ -1.29
MRE11P49959 NANOGP4-201ENST00000427230 913 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC092634.2-201ENST00000428146 1010 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MRPS33P4-201ENST00000434892 317 ntBASIC7.01□□□□□ -1.29
MRE11P49959 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AL663074.2-201ENST00000440621 479 ntBASIC7.01□□□□□ -1.29
MRE11P49959 RRM2P4-201ENST00000441721 562 ntBASIC7.01□□□□□ -1.29
MRE11P49959 ELOCP13-201ENST00000443934 329 ntBASIC7.01□□□□□ -1.29
MRE11P49959 H2AFZP6-201ENST00000444403 394 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC023271.1-201ENST00000445936 1090 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 HMGB1P7-201ENST00000450921 612 ntBASIC7.01□□□□□ -1.29
MRE11P49959 RSU1P1-201ENST00000453416 441 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MTCO2P9-201ENST00000503214 694 ntBASIC7.01□□□□□ -1.29
MRE11P49959 PRELID3BP5-201ENST00000508612 460 ntBASIC7.01□□□□□ -1.29
MRE11P49959 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 AC005351.1-201ENST00000511152 786 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC010442.1-201ENST00000515583 816 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.01□□□□□ -1.29
MRE11P49959 OR8K4P-201ENST00000534608 872 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.01□□□□□ -1.29
MRE11P49959 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 AC139697.1-201ENST00000548429 745 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.01□□□□□ -1.29
MRE11P49959 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 AC074050.1-201ENST00000563247 211 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MIR4489-201ENST00000578869 62 ntBASIC7.01□□□□□ -1.29
MRE11P49959 MIR3176-201ENST00000582210 90 ntBASIC7.01□□□□□ -1.29
MRE11P49959 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 AL589765.6-201ENST00000601909 549 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC023762.1-201ENST00000603280 584 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC098935.2-201ENST00000604222 466 ntBASIC7.01□□□□□ -1.29
MRE11P49959 FAM72A-208ENST00000607379 1139 ntBASIC7.01□□□□□ -1.29
MRE11P49959 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 AC093635.1-201ENST00000609028 555 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC019226.2-201ENST00000625973 424 ntBASIC7.01□□□□□ -1.29
MRE11P49959 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
MRE11P49959 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
MRE11P49959 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.01□□□□□ -1.29
MRE11P49959 AC002525.1-201ENST00000624392 1622 ntBASIC7.01□□□□□ -1.29
MRE11P49959 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.01□□□□□ -1.29
MRE11P49959 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
MRE11P49959 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7□□□□□ -1.29
MRE11P49959 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7□□□□□ -1.29
MRE11P49959 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7□□□□□ -1.29
MRE11P49959 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
MRE11P49959 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7□□□□□ -1.29
MRE11P49959 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
MRE11P49959 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
MRE11P49959 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7□□□□□ -1.29
MRE11P49959 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
MRE11P49959 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
MRE11P49959 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7□□□□□ -1.29
MRE11P49959 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
MRE11P49959 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms