Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SSR1P43307 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSR1P43307 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SSR1P43307 MTND5P23-201ENST00000430812 1655 ntBASIC6.01□□□□□ -1.45
SSR1P43307 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSR1P43307 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSR1P43307 HIST1H3PS1-201ENST00000404612 417 ntBASIC6□□□□□ -1.45
SSR1P43307 AC096921.1-201ENST00000411661 375 ntBASIC6□□□□□ -1.45
SSR1P43307 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6□□□□□ -1.45
SSR1P43307 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6□□□□□ -1.45
SSR1P43307 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6□□□□□ -1.45
SSR1P43307 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6□□□□□ -1.45
SSR1P43307 AC110602.1-201ENST00000437414 318 ntBASIC6□□□□□ -1.45
SSR1P43307 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6□□□□□ -1.45
SSR1P43307 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6□□□□□ -1.45
SSR1P43307 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6□□□□□ -1.45
SSR1P43307 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6□□□□□ -1.45
SSR1P43307 RNU7-157P-201ENST00000459600 66 ntBASIC6□□□□□ -1.45
SSR1P43307 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 OR7E157P-201ENST00000494376 911 ntBASIC6□□□□□ -1.45
SSR1P43307 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6□□□□□ -1.45
SSR1P43307 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6□□□□□ -1.45
SSR1P43307 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6□□□□□ -1.45
SSR1P43307 AC114781.3-201ENST00000512083 142 ntBASIC6□□□□□ -1.45
SSR1P43307 RNA5SP438-201ENST00000516561 112 ntBASIC6□□□□□ -1.45
SSR1P43307 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6□□□□□ -1.45
SSR1P43307 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6□□□□□ -1.45
SSR1P43307 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6□□□□□ -1.45
SSR1P43307 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
SSR1P43307 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6□□□□□ -1.45
SSR1P43307 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SSR1P43307 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SSR1P43307 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.99□□□□□ -1.45
SSR1P43307 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 OR55B1P-203ENST00000641518 2602 ntBASIC5.99□□□□□ -1.45
SSR1P43307 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.99□□□□□ -1.45
SSR1P43307 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.99□□□□□ -1.45
SSR1P43307 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.99□□□□□ -1.45
SSR1P43307 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 RN7SKP28-201ENST00000364770 305 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AL672167.2-201ENST00000377164 879 ntBASIC5.99□□□□□ -1.45
SSR1P43307 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.99□□□□□ -1.45
SSR1P43307 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 RNU1-136P-201ENST00000384181 164 ntBASIC5.99□□□□□ -1.45
SSR1P43307 MIR130A-201ENST00000385274 89 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AC004386.1-201ENST00000393214 761 ntBASIC5.99□□□□□ -1.45
SSR1P43307 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 BX323845.3-201ENST00000428215 527 ntBASIC5.99□□□□□ -1.45
SSR1P43307 TMEM183AP1-205ENST00000432739 290 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 NDUFS5P5-201ENST00000437256 321 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 RPL32P33-201ENST00000487023 394 ntBASIC5.99□□□□□ -1.45
SSR1P43307 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 GAPDHP62-201ENST00000515313 990 ntBASIC5.99□□□□□ -1.45
SSR1P43307 Y_RNA.667-201ENST00000516212 107 ntBASIC5.99□□□□□ -1.45
SSR1P43307 SCARNA6.1-201ENST00000516989 238 ntBASIC5.99□□□□□ -1.45
SSR1P43307 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.99□□□□□ -1.45
SSR1P43307 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 AL356801.1-201ENST00000559320 294 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AC026826.3-201ENST00000561747 158 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AC096996.1-201ENST00000563813 325 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
SSR1P43307 AC090607.5-201ENST00000615692 224 ntBASIC5.99□□□□□ -1.45
SSR1P43307 AP003499.2-201ENST00000624100 483 ntBASIC5.99□□□□□ -1.45
SSR1P43307 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.99□□□□□ -1.45
SSR1P43307 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SSR1P43307 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.98□□□□□ -1.45
SSR1P43307 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSR1P43307 AP001029.2-203ENST00000589795 4910 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms