Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.35□□□□□ -1.39
CIITAP33076 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 KCTD9P6-201ENST00000522306 950 ntBASIC6.35□□□□□ -1.39
CIITAP33076 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 RBM22P12-201ENST00000567098 1255 ntBASIC6.35□□□□□ -1.39
CIITAP33076 AC010547.7-201ENST00000570323 333 ntBASIC6.35□□□□□ -1.39
CIITAP33076 AC092944.2-201ENST00000605443 889 ntBASIC6.35□□□□□ -1.39
CIITAP33076 SNORA35B-201ENST00000607417 129 ntBASIC6.35□□□□□ -1.39
CIITAP33076 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 AC004477.3-201ENST00000614061 590 ntBASIC6.35□□□□□ -1.39
CIITAP33076 MTCO1P1-201ENST00000624263 1081 ntBASIC6.35□□□□□ -1.39
CIITAP33076 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 HSPD1P7-201ENST00000447985 1686 ntBASIC6.35□□□□□ -1.39
CIITAP33076 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.35□□□□□ -1.39
CIITAP33076 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.35□□□□□ -1.39
CIITAP33076 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CIITAP33076 CR382285.2-201ENST00000624662 1495 ntBASIC6.34□□□□□ -1.39
CIITAP33076 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CIITAP33076 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 RNA5SP132-201ENST00000364725 118 ntBASIC6.34□□□□□ -1.39
CIITAP33076 OR6K3-202ENST00000368146 996 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AL009179.1-201ENST00000406085 265 ntBASIC6.34□□□□□ -1.39
CIITAP33076 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.34□□□□□ -1.39
CIITAP33076 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.34□□□□□ -1.39
CIITAP33076 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.34□□□□□ -1.39
CIITAP33076 OR6D1P-201ENST00000436165 939 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AL590399.4-201ENST00000436561 601 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.34□□□□□ -1.39
CIITAP33076 TRBV8-1-201ENST00000481590 279 ntBASIC6.34□□□□□ -1.39
CIITAP33076 ATP5LP5-201ENST00000483050 299 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AL136038.1-201ENST00000497246 351 ntBASIC6.34□□□□□ -1.39
CIITAP33076 MORF4L2P1-201ENST00000503761 858 ntBASIC6.34□□□□□ -1.39
CIITAP33076 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 GAPDHP62-201ENST00000515313 990 ntBASIC6.34□□□□□ -1.39
CIITAP33076 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 AC015720.2-201ENST00000567709 334 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.34□□□□□ -1.39
CIITAP33076 AC105148.1-201ENST00000604961 409 ntBASIC6.34□□□□□ -1.39
CIITAP33076 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.34□□□□□ -1.39
CIITAP33076 AC232271.1-201ENST00000602455 2715 ntBASIC6.34□□□□□ -1.39
CIITAP33076 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CIITAP33076 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.34□□□□□ -1.39
CIITAP33076 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CIITAP33076 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CIITAP33076 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
CIITAP33076 AC011933.2-201ENST00000578539 2790 ntBASIC6.34□□□□□ -1.4
CIITAP33076 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.34□□□□□ -1.4
CIITAP33076 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CIITAP33076 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.33□□□□□ -1.4
CIITAP33076 AL513548.1-201ENST00000562904 1724 ntBASIC6.33□□□□□ -1.4
CIITAP33076 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CIITAP33076 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CIITAP33076 AC140479.2-201ENST00000421567 3130 ntBASIC6.33□□□□□ -1.4
CIITAP33076 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.33□□□□□ -1.4
CIITAP33076 AL161912.4-201ENST00000623889 2468 ntBASIC6.33□□□□□ -1.4
CIITAP33076 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CIITAP33076 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CIITAP33076 AL121886.1-201ENST00000358609 435 ntBASIC6.33□□□□□ -1.4
CIITAP33076 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.33□□□□□ -1.4
CIITAP33076 U3.25-201ENST00000391209 220 ntBASIC6.33□□□□□ -1.4
CIITAP33076 GABARAPL3-201ENST00000412799 354 ntBASIC6.33□□□□□ -1.4
CIITAP33076 OR10T1P-201ENST00000424327 947 ntBASIC6.33□□□□□ -1.4
CIITAP33076 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.33□□□□□ -1.4
CIITAP33076 TMEM183AP1-205ENST00000432739 290 ntBASIC6.33□□□□□ -1.4
CIITAP33076 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.33□□□□□ -1.4
CIITAP33076 AL390119.1-201ENST00000440329 312 ntBASIC6.33□□□□□ -1.4
CIITAP33076 PPIAP20-201ENST00000449839 135 ntBASIC6.33□□□□□ -1.4
CIITAP33076 AC083899.1-201ENST00000454465 3819 ntBASIC6.33□□□□□ -1.4
CIITAP33076 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.33□□□□□ -1.4
CIITAP33076 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.33□□□□□ -1.4
CIITAP33076 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.33□□□□□ -1.4
CIITAP33076 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.33□□□□□ -1.4
CIITAP33076 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.33□□□□□ -1.4
CIITAP33076 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.33□□□□□ -1.4
CIITAP33076 PMS2P3-207ENST00000529061 717 ntBASIC6.33□□□□□ -1.4
CIITAP33076 AC092451.2-201ENST00000538746 658 ntBASIC6.33□□□□□ -1.4
CIITAP33076 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.33□□□□□ -1.4
CIITAP33076 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CIITAP33076 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.33□□□□□ -1.4
CIITAP33076 AC012616.1-201ENST00000600294 197 ntBASIC6.33□□□□□ -1.4
CIITAP33076 AL391001.1-201ENST00000602747 715 ntBASIC6.33□□□□□ -1.4
CIITAP33076 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.33□□□□□ -1.4
CIITAP33076 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms