Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN3P26045 AL672167.2-201ENST00000377164 879 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 RPSAP35-201ENST00000413753 818 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 RPS3P2-201ENST00000421346 701 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN3P26045 AC005297.1-201ENST00000444765 862 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN3P26045 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN3P26045 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN3P26045 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AC078878.1-201ENST00000539832 958 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN3P26045 AC016839.1-201ENST00000578162 867 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN3P26045 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 AL159169.2-201ENST00000610061 1269 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AC025574.2-201ENST00000615621 514 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AL158062.1-201ENST00000619632 745 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AC015660.5-201ENST00000623238 564 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 MIR193BHG-214ENST00000641765 509 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
PTPN3P26045 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.7□□□□□ -1.5
PTPN3P26045 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN3P26045 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN3P26045 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 OR13C1P-202ENST00000641378 2919 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AC007938.2-201ENST00000604666 2634 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN3P26045 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN3P26045 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PTPN3P26045 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC093155.2-201ENST00000420734 937 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC007161.1-204ENST00000423039 460 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 RPS10P18-201ENST00000442662 495 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC023271.1-201ENST00000445936 1090 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AP000547.1-201ENST00000454360 617 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AZGP1P2-201ENST00000454506 345 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 RN7SL197P-201ENST00000466981 299 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 RN7SL583P-201ENST00000475692 287 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 SNORA43.3-201ENST00000517240 103 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN3P26045 TRIM51DP-201ENST00000529746 596 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AC005000.1-201ENST00000536192 288 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.69□□□□□ -1.5
PTPN3P26045 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN3P26045 BRAFP1-201ENST00000445336 2703 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN3P26045 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
PTPN3P26045 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 MT-RNR2-201ENST00000387347 1559 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN3P26045 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms