Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC079776.5-201ENST00000641920 211 ntBASIC5.64□□□□□ -1.51
CDH3P22223 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDH3P22223 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH3P22223 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH3P22223 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 AC018809.2-201ENST00000602436 3823 ntBASIC5.63□□□□□ -1.51
CDH3P22223 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
CDH3P22223 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 AP001029.2-203ENST00000589795 4910 ntBASIC5.63□□□□□ -1.51
CDH3P22223 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 RN7SKP292-201ENST00000365522 317 ntBASIC5.63□□□□□ -1.51
CDH3P22223 NPM1P10-201ENST00000398310 865 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 NAP1L4P2-201ENST00000425958 899 ntBASIC5.63□□□□□ -1.51
CDH3P22223 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 NPM1P18-201ENST00000434232 732 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH3P22223 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 RPSAP37-201ENST00000470913 821 ntBASIC5.63□□□□□ -1.51
CDH3P22223 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 AC109481.1-201ENST00000509173 282 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 AC111000.6-201ENST00000514471 709 ntBASIC5.63□□□□□ -1.51
CDH3P22223 CYCSP22-201ENST00000517555 339 ntBASIC5.63□□□□□ -1.51
CDH3P22223 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 HNRNPRP2-201ENST00000528421 743 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC091078.2-201ENST00000557145 559 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 AC012146.2-201ENST00000576545 416 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH3P22223 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 AC100814.1-201ENST00000606963 623 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AC016911.1-201ENST00000613297 452 ntBASIC5.63□□□□□ -1.51
CDH3P22223 AL122125.1-201ENST00000616999 600 ntBASIC5.63□□□□□ -1.51
CDH3P22223 MTCO1P1-201ENST00000624263 1081 ntBASIC5.63□□□□□ -1.51
CDH3P22223 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH3P22223 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH3P22223 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH3P22223 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH3P22223 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDH3P22223 RNF19BPY-201ENST00000458209 1550 ntBASIC5.63□□□□□ -1.51
CDH3P22223 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
CDH3P22223 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH3P22223 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 AC079809.1-201ENST00000415468 276 ntBASIC5.62□□□□□ -1.51
CDH3P22223 GNG5P5-201ENST00000420444 220 ntBASIC5.62□□□□□ -1.51
CDH3P22223 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH3P22223 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 AL391987.1-201ENST00000441025 200 ntBASIC5.62□□□□□ -1.51
CDH3P22223 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH3P22223 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH3P22223 PPIAP20-201ENST00000449839 135 ntBASIC5.62□□□□□ -1.51
CDH3P22223 MTCYBP14-201ENST00000457471 715 ntBASIC5.62□□□□□ -1.51
CDH3P22223 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH3P22223 KCTD9P6-201ENST00000522306 950 ntBASIC5.62□□□□□ -1.51
CDH3P22223 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.62□□□□□ -1.51
CDH3P22223 AC130364.2-201ENST00000528639 604 ntBASIC5.62□□□□□ -1.51
CDH3P22223 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH3P22223 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH3P22223 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH3P22223 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH3P22223 AC015802.2-201ENST00000589690 189 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms