Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 OR52B3P-201ENST00000314715 928 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AL159987.1-201ENST00000347911 293 ntBASIC5.53□□□□□ -1.52
CDH1P12830 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH1P12830 Y_RNA.110-201ENST00000363220 99 ntBASIC5.53□□□□□ -1.52
CDH1P12830 RNU6-819P-201ENST00000364116 107 ntBASIC5.53□□□□□ -1.52
CDH1P12830 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDH1P12830 OR7E101P-201ENST00000400428 513 ntBASIC5.53□□□□□ -1.52
CDH1P12830 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 RPS3P2-201ENST00000421346 701 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AC013410.2-201ENST00000422627 201 ntBASIC5.53□□□□□ -1.52
CDH1P12830 VN1R21P-201ENST00000426703 765 ntBASIC5.53□□□□□ -1.52
CDH1P12830 KCTD9P1-201ENST00000430462 1167 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH1P12830 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 MAPRE1P3-201ENST00000435438 796 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 RPSAP37-201ENST00000470913 821 ntBASIC5.53□□□□□ -1.52
CDH1P12830 NENFP3-201ENST00000503735 313 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.53□□□□□ -1.52
CDH1P12830 SNORA70.20-201ENST00000516848 126 ntBASIC5.53□□□□□ -1.52
CDH1P12830 IGKV2-4-201ENST00000523070 340 ntBASIC5.53□□□□□ -1.52
CDH1P12830 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH1P12830 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.53□□□□□ -1.52
CDH1P12830 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
CDH1P12830 OR51C1P-201ENST00000608504 942 ntBASIC5.53□□□□□ -1.52
CDH1P12830 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AP005431.1-201ENST00000618479 319 ntBASIC5.53□□□□□ -1.52
CDH1P12830 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH1P12830 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH1P12830 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 MTND4P21-201ENST00000453886 1357 ntBASIC5.53□□□□□ -1.52
CDH1P12830 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CDH1P12830 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH1P12830 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH1P12830 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDH1P12830 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.52□□□□□ -1.53
CDH1P12830 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDH1P12830 SLC20A1P1-201ENST00000413906 956 ntBASIC5.52□□□□□ -1.53
CDH1P12830 IPPKP1-201ENST00000422501 768 ntBASIC5.52□□□□□ -1.53
CDH1P12830 HMGN2P27-201ENST00000427352 270 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH1P12830 NDUFA5P1-201ENST00000433858 341 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 NPM1P19-201ENST00000450070 712 ntBASIC5.52□□□□□ -1.53
CDH1P12830 CYCSP53-201ENST00000455540 265 ntBASIC5.52□□□□□ -1.53
CDH1P12830 RPS23P2-201ENST00000463671 415 ntBASIC5.52□□□□□ -1.53
CDH1P12830 UBFD1P1-201ENST00000473259 814 ntBASIC5.52□□□□□ -1.53
CDH1P12830 RPS17P15-201ENST00000475609 349 ntBASIC5.52□□□□□ -1.53
CDH1P12830 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 AC009120.1-201ENST00000493458 473 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.52□□□□□ -1.53
CDH1P12830 GAPDHP62-201ENST00000515313 990 ntBASIC5.52□□□□□ -1.53
CDH1P12830 SNORA70.17-201ENST00000516449 133 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH1P12830 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.52□□□□□ -1.53
CDH1P12830 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.52□□□□□ -1.53
CDH1P12830 NDUFA5P11-201ENST00000567995 343 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC020978.7-201ENST00000575953 1187 ntBASIC5.52□□□□□ -1.53
CDH1P12830 AC027216.1-201ENST00000577726 685 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms