Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.67□□□□□ -1.5
CD48P09326 TCP11X1-202ENST00000622971 1372 ntBASIC5.67□□□□□ -1.5
CD48P09326 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD48P09326 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD48P09326 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 RN7SKP28-201ENST00000364770 305 ntBASIC5.67□□□□□ -1.5
CD48P09326 RN7SKP6-201ENST00000364795 319 ntBASIC5.67□□□□□ -1.5
CD48P09326 GAPDHP42-201ENST00000406848 981 ntBASIC5.67□□□□□ -1.5
CD48P09326 BMS1P17-202ENST00000416720 316 ntBASIC5.67□□□□□ -1.5
CD48P09326 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 RPL34P3-201ENST00000421454 338 ntBASIC5.67□□□□□ -1.5
CD48P09326 NFYAP1-201ENST00000431953 972 ntBASIC5.67□□□□□ -1.5
CD48P09326 AC002504.1-201ENST00000438281 691 ntBASIC5.67□□□□□ -1.5
CD48P09326 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.67□□□□□ -1.5
CD48P09326 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.67□□□□□ -1.5
CD48P09326 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.67□□□□□ -1.5
CD48P09326 GAPDHP14-201ENST00000450472 937 ntBASIC5.67□□□□□ -1.5
CD48P09326 AL035090.1-201ENST00000454835 332 ntBASIC5.67□□□□□ -1.5
CD48P09326 RNA5SP230-201ENST00000517039 122 ntBASIC5.67□□□□□ -1.5
CD48P09326 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.67□□□□□ -1.5
CD48P09326 AL359219.2-201ENST00000555184 348 ntBASIC5.67□□□□□ -1.5
CD48P09326 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
CD48P09326 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 AC010547.6-201ENST00000571789 193 ntBASIC5.67□□□□□ -1.5
CD48P09326 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CD48P09326 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.67□□□□□ -1.5
CD48P09326 PCA3_2.1-201ENST00000612507 409 ntBASIC5.67□□□□□ -1.5
CD48P09326 AP005212.4-201ENST00000614206 710 ntBASIC5.67□□□□□ -1.5
CD48P09326 AL162574.1-201ENST00000615702 950 ntBASIC5.67□□□□□ -1.5
CD48P09326 AC022960.2-201ENST00000616300 666 ntBASIC5.67□□□□□ -1.5
CD48P09326 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CD48P09326 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CD48P09326 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD48P09326 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CD48P09326 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.66□□□□□ -1.5
CD48P09326 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.66□□□□□ -1.5
CD48P09326 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.66□□□□□ -1.5
CD48P09326 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 MIR551A-201ENST00000385042 96 ntBASIC5.66□□□□□ -1.5
CD48P09326 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AP000281.1-201ENST00000444036 316 ntBASIC5.66□□□□□ -1.5
CD48P09326 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.66□□□□□ -1.5
CD48P09326 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD48P09326 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 IGBP1P4-201ENST00000503202 879 ntBASIC5.66□□□□□ -1.5
CD48P09326 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.66□□□□□ -1.5
CD48P09326 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.66□□□□□ -1.5
CD48P09326 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 RBM22P12-201ENST00000567098 1255 ntBASIC5.66□□□□□ -1.5
CD48P09326 NDUFA5P11-201ENST00000567995 343 ntBASIC5.66□□□□□ -1.5
CD48P09326 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.66□□□□□ -1.5
CD48P09326 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.66□□□□□ -1.5
CD48P09326 AL583832.1-201ENST00000603227 784 ntBASIC5.66□□□□□ -1.5
CD48P09326 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CD48P09326 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD48P09326 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CD48P09326 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms