Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DPB1P04440 AL034549.2-201ENST00000618285 3373 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 OR52B3P-201ENST00000314715 928 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC017079.1-201ENST00000333650 415 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 OOSP1-201ENST00000398992 1270 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 SNORA11.5-201ENST00000408163 128 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AK4P4-201ENST00000419465 646 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 RPS3P2-201ENST00000421346 701 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC017019.1-201ENST00000426129 261 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC002069.1-201ENST00000429649 1159 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 HMGB3P24-201ENST00000433260 622 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC012512.1-201ENST00000446594 718 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC094085.1-201ENST00000468914 584 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 TMEM97P2-201ENST00000517841 403 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AP000648.1-201ENST00000529682 397 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 TRIM51DP-201ENST00000529746 596 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 LSM3P2-201ENST00000551246 273 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 NDUFA5P11-201ENST00000567995 343 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 PRPF19P1-201ENST00000584766 898 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC006363.1-201ENST00000603806 463 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AL031601.1-201ENST00000605702 394 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AP005431.1-201ENST00000618479 319 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 PWAR1-201ENST00000624188 2414 ntBASIC4.91□□□□□ -1.62
HLA-DPB1P04440 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DPB1P04440 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.9□□□□□ -1.62
HLA-DPB1P04440 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 SLC20A1P1-201ENST00000413906 956 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 RPSAP41-201ENST00000439695 860 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AL358876.1-201ENST00000453364 1075 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC011476.1-201ENST00000466725 307 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 RPSAP37-201ENST00000470913 821 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC073610.1-201ENST00000489971 396 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 SNORA70.20-201ENST00000516848 126 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC021678.3-201ENST00000517893 476 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC006349.1-201ENST00000555526 235 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC015802.2-201ENST00000589690 189 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC108738.1-201ENST00000603703 237 ntBASIC4.9□□□□□ -1.63
HLA-DPB1P04440 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DPB1P04440 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms