Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SEPT14P12-201ENST00000442280 560 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AZGP1P2-201ENST00000454506 345 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AL157777.1-201ENST00000468100 304 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RPL5P16-201ENST00000471467 790 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RPS12P31-201ENST00000491419 398 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RN7SL104P-201ENST00000498686 293 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 IGBP1P4-201ENST00000503202 879 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 HMGB3P16-201ENST00000508037 287 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 NACAP5-201ENST00000509863 636 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 BTG4P1-201ENST00000510421 183 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AP001000.1-201ENST00000526843 742 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AP003033.2-201ENST00000528901 805 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC084121.1-201ENST00000533882 835 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC116158.1-201ENST00000560231 2129 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC138207.8-204ENST00000579588 527 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 WBP1LP12-201ENST00000604449 331 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC092681.3-201ENST00000609463 678 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 uc_338.29-201ENST00000615099 168 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 HTR1DP1-201ENST00000616500 888 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC037198.3-201ENST00000616754 526 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC015914.2-201ENST00000618167 288 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 LINC01613-201ENST00000561476 2780 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC021242.1-201ENST00000507315 2035 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 GNL2P1-201ENST00000451274 2190 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC068870.1-201ENST00000563737 2455 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 SMG1P7-201ENST00000565246 2704 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AL132875.1-201ENST00000403623 949 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AL589994.1-201ENST00000404962 340 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 Z68694.1-201ENST00000413929 841 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 DEFA9P-201ENST00000433042 285 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC073476.1-201ENST00000452854 407 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC023245.1-201ENST00000468501 517 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 OR2A3P-201ENST00000493774 953 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 SUMO2P4-201ENST00000504193 276 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 SETP21-201ENST00000514799 892 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC090022.1-201ENST00000546569 311 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 LINC00556-201ENST00000569603 412 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC010547.7-201ENST00000570323 333 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 ARGFXP2-201ENST00000579304 949 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 H3F3BP2-201ENST00000583907 357 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC009237.13-201ENST00000603193 276 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 TAS2R6P-201ENST00000605022 826 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AC087821.1-201ENST00000623639 567 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 AL357562.1-201ENST00000624911 609 ntBASIC4.13□□□□□ -1.75
HLA-DQA1P01909 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DQA1P01909 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms