Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.6□□□□□ -1.51
LDLRP01130 AL022394.1-201ENST00000606979 292 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AP000864.1-201ENST00000609424 650 ntBASIC5.6□□□□□ -1.51
LDLRP01130 RFPL4AP6-201ENST00000616792 846 ntBASIC5.6□□□□□ -1.51
LDLRP01130 AL391262.2-201ENST00000622466 494 ntBASIC5.6□□□□□ -1.51
LDLRP01130 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 AC073869.7-201ENST00000640874 297 ntBASIC5.6□□□□□ -1.51
LDLRP01130 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LDLRP01130 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LDLRP01130 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
LDLRP01130 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LDLRP01130 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LDLRP01130 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 AC022417.1-201ENST00000624768 1303 ntBASIC5.59□□□□□ -1.51
LDLRP01130 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 TMSB4XP2-201ENST00000335179 210 ntBASIC5.59□□□□□ -1.51
LDLRP01130 SNORA21-201ENST00000362423 132 ntBASIC5.59□□□□□ -1.51
LDLRP01130 RN7SKP185-201ENST00000362813 326 ntBASIC5.59□□□□□ -1.51
LDLRP01130 SNORA74A-201ENST00000364089 198 ntBASIC5.59□□□□□ -1.51
LDLRP01130 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 MIR1203-201ENST00000408812 85 ntBASIC5.59□□□□□ -1.51
LDLRP01130 OR3A2-201ENST00000408891 1076 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRP01130 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 AL035660.1-201ENST00000422041 222 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AC007064.3-201ENST00000422608 359 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AC106901.1-201ENST00000425086 698 ntBASIC5.59□□□□□ -1.51
LDLRP01130 CRIP1P1-201ENST00000427567 185 ntBASIC5.59□□□□□ -1.51
LDLRP01130 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRP01130 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRP01130 AL512593.1-201ENST00000444758 779 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AC023271.1-201ENST00000445936 1090 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC002553.3-201ENST00000453002 341 ntBASIC5.59□□□□□ -1.51
LDLRP01130 RN7SL610P-201ENST00000463845 291 ntBASIC5.59□□□□□ -1.51
LDLRP01130 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 OR7E157P-201ENST00000494376 911 ntBASIC5.59□□□□□ -1.51
LDLRP01130 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 ATG10-AS1-201ENST00000504846 648 ntBASIC5.59□□□□□ -1.51
LDLRP01130 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRP01130 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRP01130 RNA5SP434-201ENST00000516647 121 ntBASIC5.59□□□□□ -1.51
LDLRP01130 OR4A42P-201ENST00000531397 938 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRP01130 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC009962.1-201ENST00000567327 3813 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.59□□□□□ -1.51
LDLRP01130 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRP01130 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRP01130 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.59□□□□□ -1.51
LDLRP01130 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.59□□□□□ -1.51
LDLRP01130 AL023583.1-201ENST00000607518 1143 ntBASIC5.59□□□□□ -1.51
LDLRP01130 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.59□□□□□ -1.51
LDLRP01130 AP005431.1-201ENST00000618479 319 ntBASIC5.59□□□□□ -1.51
LDLRP01130 HPVC1-201ENST00000629899 1198 ntBASIC5.59□□□□□ -1.51
LDLRP01130 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
LDLRP01130 AL163152.1-201ENST00000642001 374 ntBASIC5.59□□□□□ -1.51
LDLRP01130 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.59□□□□□ -1.51
LDLRP01130 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
LDLRP01130 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.59□□□□□ -1.52
LDLRP01130 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.52
LDLRP01130 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LDLRP01130 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LDLRP01130 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LDLRP01130 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 Z83820.1-201ENST00000456978 1499 ntBASIC5.58□□□□□ -1.52
LDLRP01130 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 AL929601.4-201ENST00000613011 1341 ntBASIC5.58□□□□□ -1.52
LDLRP01130 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms