Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC015802.5-201ENST00000607478 399 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC026367.3-201ENST00000619032 590 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 MIR6813-201ENST00000621638 56 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC093909.5-201ENST00000621839 1799 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC018628.1-201ENST00000624147 3819 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AP005435.3-201ENST00000531260 3198 ntBASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RN7SKP184-201ENST00000362348 333 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RNA5SP477-201ENST00000362639 119 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RNU6-697P-201ENST00000363348 107 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RN7SKP171-201ENST00000364417 303 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RNA5SP241-201ENST00000391326 114 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 GABARAPL3-201ENST00000412799 354 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC019070.1-201ENST00000415008 1024 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AK4P4-201ENST00000419465 646 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC006335.2-201ENST00000437993 330 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RPS10P18-201ENST00000442662 495 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC092709.1-201ENST00000521355 1045 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 BCAS2P1-201ENST00000528022 632 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AL731537.2-201ENST00000561565 951 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RN7SL290P-201ENST00000578661 300 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 H3F3BP2-201ENST00000583907 357 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC104307.1-201ENST00000616142 196 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AL078621.3-201ENST00000623707 2042 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 Z83820.1-201ENST00000456978 1499 ntBASIC5.07□□□□□ -1.6
TRBV4-1A0A0J9YWV2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 MRE11P1-201ENST00000464884 2127 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RNU6-618P-201ENST00000363518 112 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC106901.1-201ENST00000425086 698 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AL590623.1-201ENST00000427864 105 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 IGBP1P4-201ENST00000503202 879 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC138409.2-202ENST00000507274 458 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 OR5H7P-201ENST00000514084 930 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AP000619.2-201ENST00000546014 969 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LINC00556-201ENST00000569603 412 ntBASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.06□□□□□ -1.6
TRBV4-1A0A0J9YWV2 LSM1P2-201ENST00000604911 322 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms