Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CcsQ9WU84 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CcsQ9WU84 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CcsQ9WU84 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CcsQ9WU84 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CcsQ9WU84 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.12□□□□□ -0.31
CcsQ9WU84 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CcsQ9WU84 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CcsQ9WU84 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.11□□□□□ -0.31
CcsQ9WU84 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CcsQ9WU84 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CcsQ9WU84 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.1□□□□□ -0.31
CcsQ9WU84 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CcsQ9WU84 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.1□□□□□ -0.31
CcsQ9WU84 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CcsQ9WU84 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CcsQ9WU84 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CcsQ9WU84 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms