Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc7Q9D541 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc7Q9D541 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Gm3375-201ENSMUST00000203929 796 ntBASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc7Q9D541 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.7■□□□□ 0.74
Ccdc7Q9D541 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc7Q9D541 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Gm21814-202ENSMUST00000203277 873 ntBASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc7Q9D541 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gm715-201ENSMUST00000117865 831 ntBASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gm18958-201ENSMUST00000174258 762 ntBASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc7Q9D541 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Dancr-204ENSMUST00000132389 2347 ntBASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc7Q9D541 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc7Q9D541 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc7Q9D541 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc7Q9D541 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc7Q9D541 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms