Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ssr1Q9CY50 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Gm18025-201ENSMUST00000221733 862 ntBASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ssr1Q9CY50 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ssr1Q9CY50 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ssr1Q9CY50 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ssr1Q9CY50 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Gm12382-201ENSMUST00000122005 922 ntBASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ssr1Q9CY50 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Trmt13-210ENSMUST00000198454 880 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms