Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb4Q91XZ6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhb4Q91XZ6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Gm24841-201ENSMUST00000158676 357 ntBASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Gm20760-201ENSMUST00000179197 648 ntBASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb4Q91XZ6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.73■□□□□ 0.27
Pcdhb4Q91XZ6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb4Q91XZ6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms