Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17■□□□□ 0.31
Clip4Q8CI96 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clip4Q8CI96 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Gm15565-201ENSMUST00000118890 427 ntBASIC16.99■□□□□ 0.31
Clip4Q8CI96 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Gm4974-201ENSMUST00000209974 875 ntBASIC16.99■□□□□ 0.31
Clip4Q8CI96 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clip4Q8CI96 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clip4Q8CI96 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Gm3375-201ENSMUST00000203929 796 ntBASIC16.97■□□□□ 0.31
Clip4Q8CI96 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.97■□□□□ 0.31
Clip4Q8CI96 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clip4Q8CI96 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.96■□□□□ 0.31
Clip4Q8CI96 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.96■□□□□ 0.31
Clip4Q8CI96 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms