Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tsen54Q8C2A2 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.15□□□□□ -0.15
Tsen54Q8C2A2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Gm13148-201ENSMUST00000118892 745 ntBASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tsen54Q8C2A2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tsen54Q8C2A2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tsen54Q8C2A2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tsen54Q8C2A2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tsen54Q8C2A2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms