Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Gm10819-201ENSMUST00000099988 561 ntBASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh19Q80TF3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh19Q80TF3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh19Q80TF3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Gm27704-201ENSMUST00000185094 107 ntBASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.52■□□□□ 0.24
Pcdh19Q80TF3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh19Q80TF3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh19Q80TF3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdh19Q80TF3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh19Q80TF3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh19Q80TF3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh19Q80TF3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms