Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.55■□□□□ 0.08
Clcn4Q61418 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Clcn4Q61418 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.55■□□□□ 0.08
Clcn4Q61418 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.55■□□□□ 0.08
Clcn4Q61418 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clcn4Q61418 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Clcn4Q61418 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Gm12382-201ENSMUST00000122005 922 ntBASIC15.54■□□□□ 0.08
Clcn4Q61418 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Gm37055-201ENSMUST00000191866 133 ntBASIC15.54■□□□□ 0.08
Clcn4Q61418 Gm42545-201ENSMUST00000202755 922 ntBASIC15.54■□□□□ 0.08
Clcn4Q61418 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Clcn4Q61418 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcn4Q61418 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Clcn4Q61418 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcn4Q61418 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Clcn4Q61418 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.52■□□□□ 0.08
Clcn4Q61418 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.52■□□□□ 0.08
Clcn4Q61418 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.52■□□□□ 0.08
Clcn4Q61418 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.52■□□□□ 0.08
Clcn4Q61418 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.52■□□□□ 0.08
Clcn4Q61418 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcn4Q61418 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Clcn4Q61418 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Clcn4Q61418 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clcn4Q61418 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcn4Q61418 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clcn4Q61418 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcn4Q61418 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.51■□□□□ 0.07
Clcn4Q61418 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms