Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col12a1Q60847 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.66■□□□□ 0.26
Col12a1Q60847 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.66■□□□□ 0.26
Col12a1Q60847 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.66■□□□□ 0.26
Col12a1Q60847 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.66■□□□□ 0.26
Col12a1Q60847 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.66■□□□□ 0.26
Col12a1Q60847 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.66■□□□□ 0.26
Col12a1Q60847 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Col12a1Q60847 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col12a1Q60847 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.65■□□□□ 0.26
Col12a1Q60847 Gm7506-201ENSMUST00000207758 815 ntBASIC16.65■□□□□ 0.26
Col12a1Q60847 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col12a1Q60847 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Gm27000-201ENSMUST00000182943 842 ntBASIC16.65■□□□□ 0.26
Col12a1Q60847 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.65■□□□□ 0.26
Col12a1Q60847 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.65■□□□□ 0.26
Col12a1Q60847 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.64■□□□□ 0.25
Col12a1Q60847 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Col12a1Q60847 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.64■□□□□ 0.25
Col12a1Q60847 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col12a1Q60847 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.64■□□□□ 0.25
Col12a1Q60847 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.64■□□□□ 0.25
Col12a1Q60847 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col12a1Q60847 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.63■□□□□ 0.25
Col12a1Q60847 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.63■□□□□ 0.25
Col12a1Q60847 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.63■□□□□ 0.25
Col12a1Q60847 Gm44872-201ENSMUST00000207864 420 ntBASIC16.63■□□□□ 0.25
Col12a1Q60847 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col12a1Q60847 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Mir8117-201ENSMUST00000184773 107 ntBASIC16.63■□□□□ 0.25
Col12a1Q60847 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.63■□□□□ 0.25
Col12a1Q60847 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 BC021767-201ENSMUST00000126387 1716 ntBASIC16.63■□□□□ 0.25
Col12a1Q60847 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.63■□□□□ 0.25
Col12a1Q60847 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.63■□□□□ 0.25
Col12a1Q60847 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col12a1Q60847 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Col12a1Q60847 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.62■□□□□ 0.25
Col12a1Q60847 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col12a1Q60847 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col12a1Q60847 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Gm20949-201ENSMUST00000206478 952 ntBASIC16.62■□□□□ 0.25
Col12a1Q60847 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col12a1Q60847 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
Col12a1Q60847 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col12a1Q60847 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Col12a1Q60847 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col12a1Q60847 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms