Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atp13a4Q5XF90 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp13a4Q5XF90 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.21■□□□□ 0.51
Atp13a4Q5XF90 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp13a4Q5XF90 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp13a4Q5XF90 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp13a4Q5XF90 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp13a4Q5XF90 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms