Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Gm12382-201ENSMUST00000122005 922 ntBASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Gm4974-201ENSMUST00000209974 875 ntBASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav7d-3Q5R1I1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav7d-3Q5R1I1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Gm20049-201ENSMUST00000219950 730 ntBASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav7d-3Q5R1I1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms