Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne3Q4FZC9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne3Q4FZC9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Syne3Q4FZC9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Syne3Q4FZC9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.89■□□□□ 0.45
Syne3Q4FZC9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Syne3Q4FZC9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Gm30025-201ENSMUST00000218555 728 ntBASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Syne3Q4FZC9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Syne3Q4FZC9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Syne3Q4FZC9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms