Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.19□□□□□ -0.14
Mmp9P41245 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Gm20760-201ENSMUST00000179197 648 ntBASIC14.19□□□□□ -0.14
Mmp9P41245 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.19□□□□□ -0.14
Mmp9P41245 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.19□□□□□ -0.14
Mmp9P41245 Gm7514-201ENSMUST00000209475 934 ntBASIC14.19□□□□□ -0.14
Mmp9P41245 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Mmp9P41245 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mmp9P41245 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp9P41245 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp9P41245 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.18□□□□□ -0.14
Mmp9P41245 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mmp9P41245 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Mmp9P41245 Gm29791-202ENSMUST00000207888 369 ntBASIC14.18□□□□□ -0.14
Mmp9P41245 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.18□□□□□ -0.14
Mmp9P41245 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.18□□□□□ -0.14
Mmp9P41245 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mmp9P41245 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.17□□□□□ -0.14
Mmp9P41245 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Mmp9P41245 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Mmp9P41245 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.17□□□□□ -0.14
Mmp9P41245 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Mmp9P41245 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
Mmp9P41245 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Mmp9P41245 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mmp9P41245 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mmp9P41245 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp9P41245 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Gm8520-201ENSMUST00000186517 868 ntBASIC14.16□□□□□ -0.14
Mmp9P41245 Gm10252-201ENSMUST00000209541 832 ntBASIC14.16□□□□□ -0.14
Mmp9P41245 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.16□□□□□ -0.14
Mmp9P41245 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Mmp9P41245 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mmp9P41245 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Mmp9P41245 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mmp9P41245 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms