Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SncaO55042 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Haglr-201ENSMUST00000100000 2085 ntBASIC13.99□□□□□ -0.17
SncaO55042 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.99□□□□□ -0.17
SncaO55042 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Gm12896-201ENSMUST00000118430 226 ntBASIC13.99□□□□□ -0.17
SncaO55042 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.99□□□□□ -0.17
SncaO55042 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.99□□□□□ -0.17
SncaO55042 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SncaO55042 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SncaO55042 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SncaO55042 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SncaO55042 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SncaO55042 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.98□□□□□ -0.17
SncaO55042 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SncaO55042 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.98□□□□□ -0.17
SncaO55042 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.98□□□□□ -0.17
SncaO55042 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.98□□□□□ -0.17
SncaO55042 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SncaO55042 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SncaO55042 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SncaO55042 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.97□□□□□ -0.17
SncaO55042 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Gm13158-201ENSMUST00000122007 736 ntBASIC13.97□□□□□ -0.17
SncaO55042 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.97□□□□□ -0.17
SncaO55042 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.97□□□□□ -0.17
SncaO55042 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SncaO55042 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SncaO55042 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.97□□□□□ -0.17
SncaO55042 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SncaO55042 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.96□□□□□ -0.17
SncaO55042 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SncaO55042 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.96□□□□□ -0.17
SncaO55042 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.96□□□□□ -0.17
SncaO55042 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.96□□□□□ -0.17
SncaO55042 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.96□□□□□ -0.17
SncaO55042 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SncaO55042 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SncaO55042 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms