Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28043E0CXC2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Gm29791-202ENSMUST00000207888 369 ntBASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28043E0CXC2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Gm13168-201ENSMUST00000121771 632 ntBASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Gm8520-201ENSMUST00000186517 868 ntBASIC16.92■□□□□ 0.3
Gm28043E0CXC2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Gm18025-201ENSMUST00000221733 862 ntBASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm28043E0CXC2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm28043E0CXC2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms