Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Gm22697-201ENSMUST00000175194 63 ntBASIC19.72■□□□□ 0.75
Usp42B2RQC2 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.72■□□□□ 0.75
Usp42B2RQC2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp42B2RQC2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gm21559-201ENSMUST00000220638 855 ntBASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gm8587-201ENSMUST00000076538 843 ntBASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp42B2RQC2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Gm13216-201ENSMUST00000117145 591 ntBASIC19.7■□□□□ 0.74
Usp42B2RQC2 Gm18101-201ENSMUST00000215769 548 ntBASIC19.7■□□□□ 0.74
Usp42B2RQC2 Gm18115-201ENSMUST00000221209 621 ntBASIC19.7■□□□□ 0.74
Usp42B2RQC2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.7■□□□□ 0.74
Usp42B2RQC2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp42B2RQC2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Gm44450-201ENSMUST00000199528 114 ntBASIC19.69■□□□□ 0.74
Usp42B2RQC2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp42B2RQC2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.68■□□□□ 0.74
Usp42B2RQC2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Gm13836-201ENSMUST00000121159 501 ntBASIC19.68■□□□□ 0.74
Usp42B2RQC2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp42B2RQC2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms